KEGG   Corynebacterium halotolerans: A605_04020
Entry
A605_04020        CDS       T02472                                 
Name
(GenBank) DNA helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
chn  Corynebacterium halotolerans
Pathway
chn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:chn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    A605_04020
  09124 Replication and repair
   03420 Nucleotide excision repair
    A605_04020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chn03021]
    A605_04020
   03400 DNA repair and recombination proteins [BR:chn03400]
    A605_04020
Enzymes [BR:chn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A605_04020
Transcription machinery [BR:chn03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     A605_04020
DNA repair and recombination proteins [BR:chn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     A605_04020
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom DEAD AAA_22
Other DBs
NCBI-ProteinID: AGF71815
UniProt: M1NWE3
Position
complement(861172..862839)
AA seq 555 aa
MAFGDGPLIVQSDKTVLLEIDHALAEEARAALAPFAELERAPEHVHTYRITPLALWNARA
AGHDAEQVVDVLERYSRFPVPQPLLIDVAEIMSRYGRVTLHKHPAHGLVLESQEPAILAE
LTRHKKIRPMLGAQIDAETIAVHPSERGRLKQELLKVGWPAEDLAGYVDGEAHPIDLSTA
HEQWELRDYQRYAADSFWEGGSGVVVLPCGAGKTMVGAASMAKARATTLILVTNTVAGRQ
WKDELLRRTTLTEDEIGEYSGEKKEIRPVTIATYQVVTRKTRGEYRALELFDSRDWGLII
YDEVHLLPAPVFRMTSDLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDLETAG
YIATAECVEVRTTMSESERMVYATAETGERYRLAASASGKLRVVEKLLARHEGQPTLIIG
AYLDQLEELSERFDAPIIEGRTSNRKREALFDQFRNGEISVLVVSKVANFSIDLPEAAVA
IQVSGTFGSRQEEAQRLGRLLRPKKDGGQAHFYSVVSRDTLDAEYAAHRQRFLAEQGYAY
RIVDAEDLGTLDRLN
NT seq 1668 nt   +upstreamnt  +downstreamnt
ttggcattcggcgacggacccctgatcgtccagtccgacaagaccgtcctgctcgagatc
gaccacgccctggccgaggaggcccgcgccgcgctcgcccccttcgcggagctggagcgc
gcgcccgagcacgtccacacctaccgcatcaccccgctggcgctgtggaacgcgcgcgcc
gccggccacgacgccgagcaggtcgtcgacgtcctcgagcggtactcccgcttccccgtc
ccgcagccgctgctcatcgacgtcgccgagatcatgagccgctacggccgcgtcaccctg
cacaagcaccccgcccacgggctcgtcctcgagtcgcaggagccggccatcctggcggag
ctgacccgccacaagaagatcaggccgatgctcggggcacagatcgacgccgaaaccatc
gccgtgcacccctccgagcgcggccggctcaagcaggagctgctcaaggtgggctggccc
gccgaggatctggccggctacgtcgacggcgaggcccaccccatcgacctgtccaccgcc
catgagcagtgggagctgcgggactaccagcgctacgccgccgactccttctgggagggc
ggctccggcgtggtggtcctgccctgcggcgcgggcaagaccatggtgggtgcggcgtcg
atggcgaaggcccgggctaccaccctcatcctggtcaccaacaccgtggccggccggcag
tggaaggacgagctgctgcgacggaccaccctgaccgaggacgagatcggcgagtactcc
ggcgagaagaaggagatccgccccgtcaccatcgccacctaccaggtggtcacccgcaag
acgaggggcgagtaccgggcactggaactcttcgactcccgtgactggggcctgatcatc
tacgacgaggtccacctgcttcccgccccggtcttccgcatgacctccgacctgcagtcg
cggcgccgcctggggctcacggccacactcgtgcgcgaggacggccgcgagggcgacgtg
ttctccctgatcgggccgaagcgttacgacgccccatggaaggacctcgagacggccggc
tacatcgcgacggccgagtgcgtcgaggtgcgcaccaccatgagcgagtccgagcggatg
gtctacgccaccgccgagacgggtgaacgctaccgcctggcggcgagcgcctccggcaag
ctgcgcgtcgtcgagaagctgctggcccggcacgaagggcagccgacgctgatcatcggc
gcctacctcgaccagctggaggagctgtcggagcgcttcgacgcccccatcatcgagggg
cggacgtcgaacaggaagcgcgaggccctgttcgaccagttccgcaacggggagatctcc
gtgctggtggtgagcaaggtggcgaacttctccatcgacctgcccgaggcggcggtggcc
atccaggtctccggcacattcggctcccgccaggaggaggcccagcgcctgggccgcctc
ctgcggccgaagaaggacggcgggcaggcccacttctactccgtggtctcccgcgacacc
ctcgacgccgagtacgccgcccaccgccagcgtttcctggccgagcaggggtacgcctac
cgcatcgtcgacgccgaggacctgggcaccctcgaccggctcaactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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