KEGG   Chromobacterium paludis: FYK34_02615
Entry
FYK34_02615       CDS       T06224                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
chrm  Chromobacterium paludis
Pathway
chrm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:chrm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FYK34_02615 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chrm03019]
    FYK34_02615 (pnp)
   03016 Transfer RNA biogenesis [BR:chrm03016]
    FYK34_02615 (pnp)
Enzymes [BR:chrm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     FYK34_02615 (pnp)
Messenger RNA biogenesis [BR:chrm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     FYK34_02615 (pnp)
Transfer RNA biogenesis [BR:chrm03016]
 Prokaryotic type
  tRNA degradation factors
   FYK34_02615 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 KH_2 DUF5776
Other DBs
NCBI-ProteinID: QEL54539
UniProt: A0A5C1DF15
Position
564034..566178
AA seq 714 aa
MFNKITKTFQFGRQTVTIETGEIARQASGSVVVSVDDTVVMVSVVGGKSVKPGQDFFPLT
VDYLERTYAAGKIPGGFFKREGKQSEKEVLTSRLIDRPIRPLFPEGFYHDVQIVATVLSL
NPEVDSDIPAMIGASAALAISGLPFAGPIGAARVGYANGEYILNPTKTELQTSQMDLVVA
GTSRAVLMVESEAKELSEAVMLGAVVFGHEQMQAAIQAINELADEVNPVMFDWAAPAKDE
ALIAQIRGIAGEKLAEAFRLRQKQARTVAINEAWDAVKAGLINEDTDTLKANEIKGIFKG
LEAEIVRGQILAGEARIDGRDTRTVRPISIRSNVLPRTHGSALFTRGETQALVVATLGTK
QDEQIIDALAGEYTERFMLHYNFPPYSTGEAGRMGPPKRREIGHGRLAKRALVAVLPPED
EFGYSMRVVSEITESNGSSSMASVCGGCLSLLSAGVPLKAHVAGIAMGLILEGNRFAVLT
DILGDEDHLGDMDFKVAGTAAGVTALQMDIKIQGITKEIMQVALEQAKEGRLHILGLMKE
AVDGPQELSAHAPRLHVMKINPEKIRDVIGKGGETIRAITKDTGCEINIEEDGTITIASV
SSEGAEAAKKRIEEITVEVEVGKVYEGTVVKILDNNVGAIVSILPGKDGLVHISQIANER
IKNVSDHLKEGQVVKVKAIEMDDRGRIRLSIKALLEEEAKTAQATAESFGLKAQ
NT seq 2145 nt   +upstreamnt  +downstreamnt
gtgttcaacaagatcaccaaaaccttccagttcggccgtcaaaccgtcaccatcgaaacc
ggtgagatcgcccgccaggcgtccggttccgtagtcgtgtccgtggacgacaccgtcgtc
atggttagcgtggtgggcggcaagtccgtcaagccgggccaagacttcttcccgctgacc
gtggactatctggagcgcacctacgccgccggcaagatcccgggcggcttcttcaagcgc
gaaggcaagcagtccgagaaggaagtgctgaccagccgcctgatcgaccgcccgatccgc
ccgctgttcccggaaggcttctaccatgacgtgcaaatcgtcgccaccgtgctgtcgctg
aatccggaagtggattcggacatcccggcgatgatcggcgcctccgccgccctggccatc
tccggtctgccgttcgccggcccgatcggcgccgcgcgcgtcggctacgccaacggcgaa
tacatcctgaacccgaccaagaccgaactgcaaacctcgcagatggacttggttgtcgcc
ggcacctcgcgcgccgtgctgatggtggaatcggaagccaaggaactgtcggaagccgtg
atgctgggcgccgtggtattcggccacgagcagatgcaagccgctatccaggccatcaac
gaactggccgacgaagtgaacccggtgatgttcgactgggccgctccggccaaggacgaa
gcgctgatcgctcaaatccgcggcatcgccggcgagaagctggccgaagccttccgcctg
cgccagaagcaagcccgcaccgtcgccatcaacgaagcttgggacgcggtcaaggccggc
ctgatcaacgaagacaccgacaccctgaaggccaacgagatcaagggcatcttcaagggt
ctggaagctgaaatcgtgcgcggccaaatcctggccggcgaagcgcgcatcgacggccgc
gacacccgcaccgtgcgtccgatcagcatccgcagcaacgtgctgccgcgcacccacggt
tccgccctgttcacccgcggcgaaacccaggcgctggtggtggccacgctgggcaccaag
caagacgagcagatcatcgacgcgctggccggcgaatacaccgagcgcttcatgctgcac
tacaacttcccgccgtactccaccggcgaagccggccgcatgggcccgccgaagcgccgc
gaaatcggccacggccgcctggccaagcgcgcgctggtagccgtgctgccgccggaagac
gagttcggctactccatgcgcgtggtgtccgagatcaccgaatccaacggctcctcgtcg
atggcttccgtgtgcggcggctgcctgtcgctgctgtcggccggcgtgccgctgaaggcc
cacgtggccggcatcgccatgggtctgatcctggaaggcaaccgcttcgccgtgctgacc
gacatcctgggcgatgaagatcacctgggcgacatggacttcaaggtggccggcaccgcc
gccggcgtgaccgccctgcagatggacatcaagatccagggcatcaccaaggagatcatg
caggttgcgctggagcaggccaaggaaggccgtctgcacatcctgggcctgatgaaggaa
gccgtggacggcccgcaagagctgtccgcccatgcgccgcgtctgcacgtgatgaagatc
aacccggagaagatccgcgacgtgatcggcaagggcggcgaaaccatccgcgccatcacc
aaagacaccggctgcgagatcaacatcgaagaagacggcaccatcaccatcgcttcggtg
agcagcgagggcgcggaagcggccaagaagcgcatcgaagagatcacggttgaagtggaa
gtgggcaaggtgtacgaaggcaccgtggtcaagatcctcgacaacaacgtcggcgctatc
gtctccatcctgccgggcaaggatggtctggttcacatctcgcagatcgccaacgagcgc
atcaagaatgtgtccgaccacctgaaggaaggccaagtggtgaaggtcaaggccatcgaa
atggacgaccgcggccgcatccgcctgtccatcaaggccctgctggaagaagaagcgaaa
accgcccaggcgaccgctgaatccttcggcttgaaggcgcagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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