KEGG   Capra hircus (goat): 102179051
Entry
102179051         CDS       T02910                                 
Symbol
ERCC3
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPB subunit isoform X1
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
chx  Capra hircus (goat)
Pathway
chx03022  Basal transcription factors
chx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102179051 (ERCC3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102179051 (ERCC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chx03021]
    102179051 (ERCC3)
   03400 DNA repair and recombination proteins [BR:chx03400]
    102179051 (ERCC3)
Enzymes [BR:chx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     102179051 (ERCC3)
Transcription machinery [BR:chx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     102179051 (ERCC3)
DNA repair and recombination proteins [BR:chx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     102179051 (ERCC3)
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom AAA_22 AAA_34
Other DBs
NCBI-GeneID: 102179051
NCBI-ProteinID: XP_017921279
EnsemblRapid: ENSCHIG00000014551
UniProt: A0A452EMH2
Position
2:complement(131256739..131287705)
AA seq 782 aa
MGKRDRADREKKKSKKRHYEDEEDDEDDAPGNDTQEAVPSAAGKQVDESGTKVDEYGAKD
YRLQMPLKDDHTSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHVHEYKLTA
YSLYAAVSVGLQTSDITEYLRKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESS
HPDVIQHLLQDAVIRECRLRNSEGEATELITETFTSKSAIAKSAEGSGGPSTSRVTDPQG
KSDIPTDLFDFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRND
SVNPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKR
CLVLGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSIAISTYSMLGHTTKRS
WEAERVMEWLKTQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDL
NFLIGPKLYEANWMELQNSGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNK
FRACQFLIKFHERRNDKIIVFADNVFALKEYAIRLNKPYIYGPTSQGERMQILQNFKHNP
KINTIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFY
SLVSQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEDLAFSTKEEQQQLLQKVLAAT
DLDAEEEVVAGEFGSKSSQVSRRFGTMSSMSGADDTVYMEYHSSRSKTSTKHVHPLFKRF
RK
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgggcaagagagaccgcgccgaccgcgagaagaagaagtccaagaaacggcactacgag
gatgaggaagacgatgaagacgacgcccctgggaacgacacccaggaagctgttccctcc
gcggccggaaagcaggtggatgagtccggcaccaaagtggatgagtatggagctaaggac
tacaggctgcagatgccgctgaaggacgaccacacctccagacccctctgggtggctcct
gatggccacatctttttagaagccttctctccggtttacaaatatgctcaagacttcctg
gtggctattgcagaaccggtgtgccgaccaacccatgtgcatgagtacaaactaacagcc
tactccctgtatgcagctgtcagcgtcgggctgcaaaccagtgacatcactgagtatctc
aggaagctcagcaagacaggagtcccagatggaatcattcagtttattaagttgtgtact
gtcagctatgggaaagtcaagctggtcctgaagcacaacagatacttcgttgaaagttct
catcctgacgtcatccagcatcttctccaggatgctgtgatccgggagtgccgcctgagg
aactctgagggggaggccaccgagctcatcaccgagactttcacaagcaaatctgctatt
gctaagagcgctgaaggtagcggtgggccctccacttcccgagtgacagatccacagggt
aaatctgacatccccacagacctgtttgatttttatgagcaaatggacaaggatgaggag
gaagaagaagagacacagacagtatcttttgaagtcaagcaggaaatgattgaagaactc
cagaaacgttgcatccacctggagtaccctctgttggcagaatacgactttcggaatgat
tcggtcaaccctgatatcaacattgacctgaagcccacagctgtcctcagaccttaccag
gagaagagtttgcggaagatgtttgggaacgggcgcgcgcgctccggggtcattgtcctt
ccttgtggtgctgggaagtctctggttggcgtgacagctgcgtgtaccgtcaggaagcgc
tgtctggtgctgggcaactcagccgtgtctgtggagcagtggaaagcccagttcaagatg
tggtccaccatcgacgacagccagatctgccgctttacctctgacgccaaggacaagccc
atcggctgctccattgccatcagcacctactcgatgctgggccacaccaccaaaaggtcc
tgggaagctgagcgggtgatggagtggctcaaaactcaggaatggggcctcatgatcctg
gatgaagtacacaccataccagccaagatgttccgacgggtgctcaccattgtgcaggcg
cactgcaagctgggtttgaccgcaaccctcgtccgggaagatgacaaaatcgtcgactta
aactttctgattgggccgaagctctatgaagccaactggatggagctgcagaacagtggc
tacatcgccaaagtccagtgtgccgaggtttggtgcccaatgtctcctgagttttaccgg
gagtacgtggcaatcaaaaccaagaagcggatcttgctgtacaccatgaatcccaacaaa
ttccgagcttgccagtttctgatcaagtttcatgaaaggaggaatgacaagattattgtc
tttgctgacaacgtgtttgctctgaaggaatatgccattcgcctgaacaaaccctatata
tatggtcctacgtcccagggagaaaggatgcagattctccagaatttcaagcataacccc
aaaatcaacaccatcttcatctccaaggtgggtgacacgtcgtttgatttgccagaagca
aatgttctcattcagatttcctctcacggtggatcccggcgccaggaggcccagaggcta
gggcgagtgctccgagccaaaaaagggatggttgcagaagagtacaatgccttcttctac
tcgctggtatcccaggacacacaggaaatggcttactcaaccaagcggcagaggttcttg
gtagatcaaggttacagctttaaggtgatcaccaagcttgctggcatggaagaggaagac
ttggcattctcaacgaaagaggagcaacagcaactcctacagaaggtcctggcggccact
gacctggatgctgaggaggaggtggtggcaggagaatttggctccaagtccagccaggtg
tcccggcgctttggcacgatgagctccatgtccggggcggacgacacggtgtacatggag
taccactcgtcacggagtaagacttccactaagcacgtgcacccgctcttcaagcgcttc
aggaagtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (28)   

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