KEGG   Coccidioides immitis: CIMG_00317
Entry
CIMG_00317        CDS       T01114                                 
Name
(RefSeq) 3' exoribonuclease
  KO
K12587  exosome complex component MTR3
Organism
cim  Coccidioides immitis
Pathway
cim03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cim00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CIMG_00317
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cim03019]
    CIMG_00317
Messenger RNA biogenesis [BR:cim03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     CIMG_00317
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 4565241
NCBI-ProteinID: XP_001246546
UniProt: A0A0E1RY43
AA seq 331 aa
MTDKRRINGPPGGTQPPVFLSPLSAENQKSIAERPIRSRKAAELRKIFLKSGVIPSASGS
AYLELQPSNDPAYKSRTLIPPSSSLKLVCTVHGPRPLPRSAPFSPNLLLSTHVKFAPFAG
RRRRGYIRDMYERDLAVHLETALGGMIIGDRWPKSGLDVTVNILEGEDDRWWGDSLSSGP
LGGVDGWGSMNVLASCITVASAAIVDARIDCLDLLAGGVAAIVEEKDRMSQDTNSKEQGR
YLVLDPDPSEHRDIASLCIVGYMPSRDEITEVWLKGDVSGVGYDSLMDGAVEAARAAQAI
VLEAAKESAQRFANLPTKNLLDDNEDQNMQL
NT seq 996 nt   +upstreamnt  +downstreamnt
atgacagataagagaagaataaatggacctcctggaggtactcagcctcccgtttttttg
tccccattatcagctgagaatcaaaaatcaatagctgagaggcccatccgctcacggaag
gctgctgagctcagaaaaatatttctgaaaagtggtgttatcccttcggcgtcaggatcc
gcatatctggagctgcagccctccaatgatcccgcatacaagtccagaaccctcatccca
ccctcttcgtctctgaagctcgtatgtacggtccacggccctaggcctcttccacgttct
gcaccattctctcccaaccttcttttgtcaacccacgttaaatttgcaccgttcgctggt
agaagacggaggggttatatacgcgacatgtatgagagagatttagcggtccaccttgaa
accgcccttgggggaatgattattggagatcgatggcccaagagcggtctggatgtgacc
gtaaacattttggagggagaagatgatcgatggtggggcgattcactctcctctgggcca
ctgggtggagttgacggttggggatcaatgaacgttcttgcaagctgtataacagttgct
tcagcggcaatcgtcgatgctaggattgattgcttggatttgctcgccggaggtgtggct
gctattgtggaagagaaagatcgcatgagccaggataccaactcgaaggaacaagggaga
tatttggtgctggaccccgacccgtctgaacatagggacattgcatccctttgcatagtc
ggatacatgccatctcgggacgaaataactgaggtttggcttaaaggagacgtgtctggt
gttggttacgactcccttatggatggtgctgtcgaagctgctcgagctgcgcaggctatt
gttttagaagcagcaaaagagtcagcacaacgatttgctaatttaccaacgaaaaacctt
ttggatgataatgaggatcaaaatatgcagttatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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