KEGG   Ciona intestinalis (yellow sea squirt): 100177029
Entry
100177029         CDS       T01056                                 
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 1
  KO
K06082  FERM, RhoGEF and pleckstrin domain protein 2
Organism
cin  Ciona intestinalis (yellow sea squirt)
SSDB
Motif
Pfam: PH RhoGEF FERM_C FERM_M FERM_N SOS1_NGEF_PH FA RHG20_PH PH_11 PH_13 PH_20 IQ_SEC7_PH
Other DBs
NCBI-GeneID: 100177029
NCBI-ProteinID: XP_009859507
Position
8:complement(5383636..5404916)
AA seq 1045 aa
MPHSSATVQVQMLDHSVHTYDVKVKSYGNMLLQSVMKDINLLESDYFGIQYTDRQGNRVF
LDPLKKIKSQITNISNVVLHFVVKFFPPDPGQLQEEYTRYLFALQVKQDIVDGLLPCNEN
TLVVMASYIAQSEFGDWNSFDCSDLSYLRDLKLLPPLVDMNEHDLLVKVSENHKIRTGET
KADSDYHLLDIVRRLEQYGLRLLPAKDQENTDIKLAVAHMGVVVFRGNSKINTFNWARIR
KLSFKKKRFLIKLRTETSVDKNGQNVGDILVFVMASRDTCKNFWRHCIEYHAFFRLEIHP
DPAPKPKIIKRGSTFRYSGKTQKQLHELVRNSNFRRTTFVRASARKPTIQPNNRTPQFNS
PAITVTPSVISTEHDDSGIPSPIKTEAEVNGHVTTTPDLTMASKGDGLVYSQKEEKPEEL
SPSSMATAAWQVESEHLHSSVVSVPSHETPDEAPDTTAQTAESQNESKSAEQVAPLPSPV
NLHSGGMSDPNDLTEVSALSVNGSVASSVVSPPGLLSTRGLKSTSSLSSETRYPSSQAYY
IAKEILTTERTYVKDLEVITTWFKSALQKEGSESLLPENTANQLFGGIGSLVALHQQFLC
TLDDRLSSWEGRGSTGATNDQLVDDLMLSHMLVLKKYLASLENGESLITAIEEVGDAEPK
FESLYREFELQKVCYLPFNSFLLKPMQRIAHYKLITERLMNYYEAESTLQQHPDLQSAYK
EACVLCTATQERLKRAHNLQKMAQLRRDLIGVEHLLKPNRTFIREGSLYKLSRKGFQQRL
FFLFSDCLVYTSKGVTSTNQFKVHAELPLQGMIIEVNEGESAVPNCFSILSASKTVIVAA
ATQEEMDKWLEDFSVAIARAGREMEMYESPLNNAAGSLSRLSMEQSSEDGEGSVRNSMER
LKPPMQHRSNATMHVCWHRNTSVSSSDHLVSLKNQLSGYLLRKFKNSNGWQKLWVVFTNF
CLFFYKSNQDESPLASLPLLGYTINSPTEADGIRKDFVFKLKFKTHVYFFRAESQYTYNR
WIEVISSATVTSQRTRLFSRMDSYQ
NT seq 3138 nt   +upstreamnt  +downstreamnt
atgccgcattcatcggcaacagttcaagtccagatgttggaccattctgttcacacatat
gatgttaaagttaaaagctacggtaacatgctcctacagtcagtaatgaaggatatcaat
ttactggaatccgattactttggcatccaatacacagacaggcaaggaaacagagtcttt
ttggatccacttaagaaaatcaaaagccaaattacaaacatcagcaatgtggttctacac
ttcgtggtcaagtttttcccaccagaccccggtcaactacaagaggaatatacccgctac
ttgtttgctttacaagttaagcaggatattgttgatggcctgctaccttgtaatgagaac
acattggtggtcatggcttcatacatagcccaatctgagttcggagattggaattcattc
gattgttccgacttatcctacttacgagatcttaagctcttacccccactagtggacatg
aacgagcatgatttgctcgtcaaagtttccgaaaatcataaaattcgaactggtgaaacg
aaagcagactccgactaccaccttctagacattgttcgtcgccttgaacaatatggacta
aggctgctaccggcgaaagaccaggaaaacaccgacattaagcttgcagtggcgcatatg
ggggtcgtggtgtttaggggcaattccaaaatcaacacgtttaactgggcgcgaatccga
aaacttagctttaagaaaaaacgattcctgatcaaactaagaactgaaaccagcgttgac
aaaaatggtcaaaatgttggagatatcctagttttcgttatggcttcacgagacacttgt
aaaaacttctggcgtcactgtatcgagtatcatgcattcttccgactcgaaattcaccca
gacccagccccaaaaccaaagataatcaagagaggatctacgtttagatatagcggcaaa
actcagaaacagcttcatgagttagtacgcaacagcaacttccgtcgtacaacgtttgtt
cgagcttcagcgaggaaaccaaccatccaaccaaataaccgaacaccacagtttaactct
ccagctataactgttacgccgtcagtaatctccacggaacatgacgactctggtatacca
agtccaatcaaaacagaagctgaggtcaatggtcatgttacaaccacaccagacttaacc
atggcttctaaaggagatggtttggtttattcacaaaaggaagaaaaaccagaggagttg
tcgccttcaagcatggcaactgctgcgtggcaagttgaaagtgaacacctccacagcagc
gtagtatcggtgccaagccatgagacgcctgacgaggcaccagacaccactgctcaaact
gctgagtcacagaatgagtcaaaatctgctgagcaagtggcacctcttccatcccctgtt
aatctacattcaggtggcatgtccgaccccaatgatctcactgaagtttccgcactttcg
gttaacggatccgttgcatcgagcgttgtttcacctcctggacttctctccactagaggg
ctgaagtccacgtcatcgctgagcagtgaaacgcgctacccgtcatcacaagcttactac
attgcaaaggaaatacttacaactgaacgaacatatgttaaagatttagaagttatcaca
acatggttcaagtcagcactacagaaagaaggttctgaatctcttcttcccgaaaacacg
gcgaaccagctctttggaggaatcggatcacttgtggctcttcaccagcagttcctctgt
accttggatgatcgattatcgtcctgggaggggagaggatcaacaggagccaccaacgat
caactcgtcgatgatctgatgttgagccacatgcttgtgttgaagaaatatcttgcttcg
cttgagaatggtgaatcgctcatcacagcaattgaagaagttggagacgcagaaccaaag
tttgaatctctgtaccgggagtttgaactacagaaagtttgctacctgccgttcaactct
ttcctactcaaacctatgcagagaatcgcacactacaagttgattactgagcgcttaatg
aactactatgaggctgaatcaacattacagcaacatcctgatctacaatcagcttacaag
gaagcatgtgtgctctgtactgccacccaggagcgtctcaagcgagctcacaacctccag
aagatggcgcagttgagacgtgacttgattggcgtggaacatttgttgaaacctaaccgg
acttttattagagagggaagtttatacaaattatcgcggaaaggattccaacaaagactc
ttcttcctcttctctgactgccttgtatatacaagcaaaggggtcacttctaccaaccaa
ttcaaggtccatgctgaacttcctttgcaaggaatgatcattgaggtaaatgaaggcgag
agcgcggttccgaattgtttcagtattctctccgcttccaagacggtcatcgttgccgca
gcaacgcaggaagagatggataaatggctggaggacttcagtgtcgccattgcacgagct
gggagagaaatggaaatgtatgagtcgccccttaacaatgctgcaggatctctgagtcgc
ctctccatggagcaatcctcggaagatggcgagggctcggttcgtaactcgatggaaaga
ttgaaacccccgatgcagcatcgatccaacgccactatgcatgtctgttggcatcgcaac
acaagtgtcagctcgtcggatcacctggtctcgctaaagaatcaactaagtggatatttg
ttgagaaaattcaagaattcaaacggttggcaaaagttgtgggttgttttcaccaatttc
tgtctattcttctacaagtcaaaccaggatgaatcaccactagcaagccttccactgctc
ggttacaccatcaattcaccaactgaagccgatggaatacggaaagatttcgttttcaaa
ctcaagtttaaaacccacgtgtatttcttcagggctgaaagtcaatatacttacaacaga
tggattgaagtgattagcagtgccactgtgacgtcacagagaacccgtctcttcagtcgc
atggatagctaccaatag

  All links  
Gene (76)   
   RefGene (73)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (92)   

Download RDF
DBGET integrated database retrieval system