KEGG   Ciona intestinalis (yellow sea squirt): 100183358
Entry
100183358         CDS       T01056                                 
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100183358
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cin03019]
    100183358
Messenger RNA biogenesis [BR:cin03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     100183358
SSDB
Motif
Pfam: WD40 CSTF1_dimer ANAPC4_WD40 NBCH_WD40 eIF2A VID27 Ge1_WD40 Cytochrom_D1
Other DBs
NCBI-GeneID: 100183358
NCBI-ProteinID: XP_002126933
Ensembl: ENSCING00000003910
Position
Unknown
AA seq 434 aa
MDAIKKRERMYRSIIGQLQNDGYMAIAKSLTSQVKPFNPCTSSDFLFKAYSIGLEQVEED
KTDQSYIPNVLESIPPGRGIDLEFENEVQILSPEAVQYETCYVTAHKAPTRAATFSKNGQ
YIATGSVDTSIKVLDVERMLAKSILPSDINNMMEQSSQAGGMADHPVIRTLYDHVDEITC
IEFHPTQQILVSGSRDYTVKVFDFTKSSAKRATKAISEVERVKTLAMHPAGDFILVGTHH
PVIRLYDLETFQCFVSCHPADQHKGPINCISYNQTGNYYASGSKDGEIKIWDGVSSRCIM
KFPDAHDGDDVCSVVFSRNGKYLLTSGKDSVARLWSLAAPTHPVLVYTGAELSGKQTHQA
QAVFNHTEDYVFFPDEQTVSLCCWCARTGERQRLLSLGHQGPARRIAHSPTIAAFITSSE
DFRARFWYKSPLSE
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggacgctattaaaaaaagagagagaatgtatcgctccattattggacagttgcaaaat
gatggttacatggcgattgcaaaatcgttaacatcacaagtaaagccatttaatccatgt
acatcatcagattttctctttaaagcatatagtattggtttggaacaggttgaagaagat
aaaactgatcaatcgtatattcctaatgttcttgaatcaattccacctggacgaggaata
gatttggagtttgaaaacgaagttcagattttatctcctgaagctgttcaatatgagact
tgttatgtcactgcacacaaagcaccaacaagagctgcaacattttctaagaatggtcaa
tatattgcaactggttctgttgatacttcgatcaaagttcttgatgtggaaagaatgctg
gcaaagagtattctgccatcggatataaataatatgatggaacaatcatcacaagccggt
ggaatggctgaccatccagttattcggacactctatgatcatgtggatgagataacttgc
attgagtttcatccaacccaacaaatacttgtgtctggttcaagggattatacagtaaaa
gtttttgattttaccaaaagttcagcaaaacgagcaacaaaagcaatcagtgaagtggag
agagttaaaacattggcgatgcatccagcaggtgattttattttggttggaacacatcat
cctgttattcgactttacgatcttgaaacatttcaatgttttgtaagttgccatccagca
gatcaacacaaggggcctatcaattgtatatcatacaaccaaacaggaaattattatgca
tcaggaagtaaggatggagaaatcaagatttgggatggtgtcagtagtcgctgtatcatg
aagtttccagatgctcatgatggtgacgatgtttgttctgttgttttttcccgtaatggt
aaatatttgttaacaagtggaaaagacagtgtagcacgactatggtcacttgctgcaccg
acccatccagttcttgtatacactggagccgagttaagtggaaagcagacccatcaagct
caagcagtttttaaccacactgaggattatgttttctttccggatgaacaaactgtatcg
ttgtgttgttggtgtgcacggacaggagagagacaacgattattatcacttggtcatcaa
ggtcctgcacggagaattgcacattcaccaactattgcagcttttattacatctagcgaa
gatttccgagcacgattttggtacaagtcacctttatcggagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (57)   
   KEGG ORTHOLOGY (1)   
   RefGene (52)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (73)   

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