KEGG   Ciona intestinalis (yellow sea squirt): 778819
Entry
778819            CDS       T01056                                 
Symbol
zf(c2h2)-33
Name
(RefSeq) zinc finger protein
  KO
K23560  zinc finger homeobox protein 2
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cin03000]
    778819 (zf(c2h2)-33)
Transcription factors [BR:cin03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ZF
    778819 (zf(c2h2)-33)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_6 zf-C2H2_jaz
Other DBs
NCBI-GeneID: 778819
NCBI-ProteinID: NP_001071873
UniProt: Q4H2H6
Position
1:10011031..10032349
AA seq 999 aa
MFHSKITSQSESCYFGSFRWSRKKKVLKFFLREVCKVCGKAFINIYRLQRHMLTHNAGNR
KFSCDTCGKAFKYKHHLKEHSRIHSGEKPYMCPNPRCMKRFSHSGSYSSHVSSKKCINSS
RMELSRHQNSSVTSPYGFVTSKREWNEGQPDASSLEKDGNNSIMMQLVENTSVIDNEETR
KRDEGQRMEDDDWSVIEKESFTISKENEVQTSQQTFITSRGVFISDENANGTVKDNNNNP
LDTPSYHNSGTESSGSSSSENLNSLKLLRHKIVTSNYPDVITSTATSSESNFGNWNDSLR
GQDSLTARRIMKTSPISENNTQEPFGKQQQRHRLDQNILQELKGSADNVTNKSYVMNNFL
SSVQANGDRPWIPNLFDEKSLSPRHNTEPTSPPNSVTTSSHSYDATKRYRDAWSNSNSNN
SNIAPYNFMLQQQIMQAALANAASGRVPMMQPSVLQQALAIVSANNWNMEKTENRTEVPA
MEKRRDSGNHANNPQNEPLDLSAKKRNERVSESGIPSSAVMTTPNTAVQAFQQMIRNNAM
SSNAFTSLFPGGIPLSPQTLTSPAALSPPIPPEVLYAQQLQHYLSSGLYPLDGANVLRNQ
MNQSAASNFSVKRGRPKKRSFGDANSPNRLNPNKQFLYDSMPTRRGPPFSERDIGFSLAG
PRQNGDRLSAAVPHISPMPTDMPYKCDICDKSFQKQSSLTRHKYEHTGKRPHHCNECGKS
FKHKHHLIEHQRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYAYCKPEDAIMQELRQQM
KKNGDVTSPSPNVAPKQKKRRTSPQSPYNAEAPQTGNSPSRNHLPSFFGGFFGKDAIETP
LTKAPVTDETPAAIYEKLMLQAQEKLRISSIYSGSSSHDLTSDPNSSGDEKSVKRSKTES
PVKKYFEKSATPSEDNNSIKQSQGGASPFNSTSPRKSSEDKKTNFISASDVTISPSTSPS
HSIMSSSPQEMSIIAPEDSQVTLKGSASFLHIPVAADLS
NT seq 3000 nt   +upstreamnt  +downstreamnt
atgtttcattcgaaaataaccagccaatcagaaagctgctattttggttcttttcgttgg
agcagaaaaaagaaagttttgaagttttttcttcgagaggtttgcaaagtttgcggcaaa
gctttcatcaacatttatcgcctacaacgtcatatgctgacgcacaatgcaggaaatcgt
aagtttagttgtgacacgtgcggcaaagctttcaaatacaaacatcatctgaaggaacat
agtcgaatccatagcggcgaaaagccgtacatgtgcccgaatccacgttgcatgaaaagg
ttttcacattctggctcatacagctcacatgtaagcagcaagaaatgcatcaactcatca
agaatggaattatcacgtcatcaaaactcgtctgtgacgtcaccatatggctttgtgacg
tcgaaacgtgaatggaatgaaggacaaccggacgcgtccagtttggaaaaggatggaaat
aatagcataatgatgcagcttgtggaaaacacgagcgttatcgataatgaagaaacgcgg
aagcgcgatgaaggtcagagaatggaagacgacgattggtcagtgattgagaaagaatct
ttcacgatttcgaaggaaaacgaagttcaaacgtcacaacaaacgtttattacgtcacga
ggggtttttatctcggacgaaaacgcgaatggaaccgtcaaggacaacaacaacaatcca
ctggacaccccgtcatatcacaactctggaacagaaagctcaggctcatcgagctccgaa
aacttgaatagtttaaaactgttacgtcataaaattgtgacgtcaaattaccctgacgtc
attacatcgaccgcgacatccagcgaatccaattttgggaattggaacgactcactgcgg
ggacaagactctttaaccgcccgccgaataatgaaaaccagcccaatctccgaaaacaac
acccaggaaccgtttggcaagcagcagcagcgacatcgtctggaccaaaatattctccaa
gagctgaaaggatcggctgataacgtcacaaacaaaagttacgtcatgaataactttctc
agcagtgtacaagcaaatggggaccgaccttggatcccgaacctgtttgacgaaaagtcg
ctctcaccacgtcacaataccgagcctacgtcaccgccaaattctgttactacgtcatca
catagttatgacgccacaaaaagataccgtgacgcatggagcaacagcaacagcaataac
tcaaacatagctccgtacaactttatgctgcaacaacaaatcatgcaagcagcgctcgct
aacgccgcaagtggcagagtgccaatgatgcagcccagtgttctacaacaggcgctcgcg
attgtgtcggccaacaattggaacatggaaaagacggaaaaccgcacggaagttccggcc
atggaaaaacgacgggattcaggaaaccacgccaacaatcctcaaaacgaaccgttggat
ctttcagctaagaaaagaaacgaacgagtttcggaatccggtatcccttcttcagctgta
atgacgacacccaacactgcagttcaagcatttcagcagatgatccgtaacaatgcaatg
tcatcgaatgcgttcacgagcctctttcccggtggaatcccactaagtccacaaacactg
accagtccagctgccttatcgccgccaataccccccgaagtattgtacgcacaacagcta
cagcattatttatcctctggattgtacccgttagatggcgccaatgttttacgaaatcaa
atgaaccaatcagctgcaagcaacttctcggtcaagcgaggtcggccaaagaagaggtcg
tttggagatgccaactcgccaaatcgcctcaatccgaacaaacagtttctgtacgactcc
atgccaactcgacgtgggccgccattttccgagcgagacatcggcttctcactggctggt
ccgcggcaaaatggcgaccgactttcggcggcagtacctcatatttccccgatgccaaca
gacatgccgtacaagtgtgacatctgcgacaagtcattccaaaaacaaagctcccttaca
agacataaatatgaacacacaggcaaaagaccccaccattgcaacgaatgcgggaagtcg
tttaaacacaaacatcatcttattgaacatcagcggcttcatagcggggaaaagccgtat
cagtgcgataaatgcgggaagcgcttttcacattccggctcgtactcccaacatatgaac
catagatatgcttattgcaagccagaagatgcgataatgcaagaattacgtcagcagatg
aaaaagaacggtgacgtcacatcaccaagtccaaacgtagccccaaagcagaaaaaacga
aggacttccccgcaatctccatacaacgcagaggctccccaaaccgggaattccccatcg
cgtaaccacttgccttctttcttcggtggattcttcgggaaagacgcgatagagactccg
ctaacaaaggctcctgttaccgacgaaacaccggctgcgatctatgaaaagttgatgcta
caggcacaagagaaacttcgtatatccagtatttattcaggaagttcttcacacgaccta
accagcgaccctaacagtagcggagatgaaaaatctgtgaaacgaagcaagactgagtcc
ccagtcaaaaaatattttgaaaagtcagcgacaccaagcgaggacaataactcgattaaa
cagtcgcaaggtggcgcgtcaccttttaattctacttcacctcgcaaatcaagcgaagac
aagaaaacaaatttcatttctgcctctgacgtcacaatttcaccttctacgtcaccatca
cattctattatgtcgtcatcgccgcaagaaatgtcgataattgcgccggaagacagccaa
gtcacgctgaaaggttctgcttcatttcttcacattccagttgccgctgacctttcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (81)   
   KEGG ORTHOLOGY (1)   
   RefGene (77)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (98)   

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