KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100406828
Entry
100406828         CDS       T03264                                 
Symbol
L1CAM
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
  KO
K06550  L1 cell adhesion molecule
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04360  Axon guidance
cjc04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100406828 (L1CAM)
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    100406828 (L1CAM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cjc04515]
    100406828 (L1CAM)
   04090 CD molecules [BR:cjc04090]
    100406828 (L1CAM)
   04091 Lectins [BR:cjc04091]
    100406828 (L1CAM)
Cell adhesion molecules [BR:cjc04515]
 Immunoglobulin superfamily
  L1 family
   100406828 (L1CAM)
CD molecules [BR:cjc04090]
 Proteins
  100406828 (L1CAM)
Lectins [BR:cjc04091]
 I-type lectins (Siglecs)
  100406828 (L1CAM)
SSDB
Motif
Pfam: Ig_3 I-set fn3 Ig_2 ig Bravo_FIGEY V-set C2-set_2 Pur_ac_phosph_N Ig_5 Ig_C17orf99
Other DBs
NCBI-GeneID: 100406828
NCBI-ProteinID: XP_035143953
Ensembl: ENSCJAG00000011023
Position
X:complement(145131729..145156906)
AA seq 1252 aa
MVVALRYVWPLFLCSPCLLIQIPEEYEGHHVMEPPVITEQSPRRLVVFPTDDISLKCEAS
GKPEVQFRWTRDGVHFKPKDELGVTVYQSPHSGSFTITGNNSNFAQRFQGIYRCFASNKL
GTAMSHEIRLMAEGAPKWPKETVKPVEVEEGESVVLPCHPPPSAEPLRIYWMNSKILHIK
QDERVTMGQNGNLYFANVLTSDNHSDYICHAHFPGTRTIIQKEPIDLRVKATNSMIDRKP
RLLFPTNSSSHLVALQGQPLVLECIAEGFPTPTIKWLRPSGPMPADRVTYQNHNKTLQLL
NVGEEDDGEYRCLAENSLGSARHDYYVTVEAAPYWLHKPQSHLYGPGETARLDCQVQGRP
QPEITWRINGIPVEELAKDQKYRIQRGALILSNVQPSDTMVTQCEAGNRHGLLLANAYIY
VVQLPAKILTADNQTYMAVRGSTAYLLCKAFGAPVPSVQWLDEDGTTVLQDERFFPYANG
TLGIRDLQANDTGRYFCQAANDQNNVTIVANLQIKDATQITQGPRSTIEKKGSRVTFTCQ
ASFDPSLQPSITWRGDGRDLQELGDSDKYFIEDGRLVIHSLDYSDQGNYSCVASTELDMV
ESRAQLLVVGSPGSVPRLALSDLHLLKQSQVRLSWSPAEDHNAPIEKYDIEFEDKEMAPE
KWYSLGKVPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVN
VKGEGNETTNMVITWKPLRWMDWNAPQVQYRVQWRPQGTRGPWQEQIVSDPFLVVSNTST
FVPYEIKVQAVNRQGKGPEPQVTIGYSGEDYPQAVPELEGIEILNSSAVLVKWRPVDLVQ
VKGHLRGYNVTYWREGSQRKHSKRHTHRDHVVVPANTTSVILSGLRPYSSYHLEVQAFNG
RGLGPASEFTFSTPEGVPGHPEALHVECQSNTSLRLHWQPPLSHNGVLTGYVLSYRPLDE
GGKGQLSFNLRDPELRTHNLTDLSPHLRYRFQLQATTKEGPGEAIVREGGTMALSGISDF
GNISATAGENYSVVSWVPREGQCNFRFHILFKALGEEKGGAYVSYSQSSYTQGDLQPDTD
YEIHLFKERMFQHRMAVKTNGTGRVRLPPAGFATEGWFIGFVSAIILLLLLLLILCFIKR
SKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDNEEKAFGSSQPSLNGDIKPLGSD
DSLADYGGSVDVQFNEDGSFIGQYSGKKEKEVAGGNDSSGATSPINPAVALE
NT seq 3759 nt   +upstreamnt  +downstreamnt
atggtcgtggcgctgcggtacgtgtggcctctcttcctctgcagcccctgcctgcttatc
cagatccccgaggaatatgaaggacaccatgtgatggagccacctgtcatcacagaacag
tctccacggcgcctggttgtcttccccacagatgacatcagcctcaagtgtgaggccagt
ggcaagcctgaagtgcagttccgatggacgagggatggtgtccacttcaaacccaaggat
gaactgggtgtgactgtgtaccagtcgccccactctggctccttcacaatcacgggcaac
aacagcaactttgcccagaggttccagggcatctaccgctgctttgccagcaataagctg
ggcaccgccatgtcccatgagatccggctcatggctgagggtgcccccaagtggccaaag
gagacagtgaagcctgtggaggtggaggaaggggagtcggtggttctgccttgccaccct
ccccccagtgcagagcctctccggatctactggatgaacagcaagatcttgcacatcaag
caggacgagcgggtgactatgggccaaaacggcaacctctactttgccaatgtgctcacc
tccgacaaccactcagactacatctgccacgcccacttcccaggcacccggaccatcatt
cagaaggaacccattgacctccgggtcaaggccaccaacagcatgattgacaggaagcca
cgcctgctcttccccaccaactccagcagccacctggtggccttgcaggggcagccattg
gtcctggagtgcattgccgagggctttcccacgccaaccatcaaatggctgcgccccagt
ggccccatgccagccgatcgtgtcacctaccagaaccacaacaagaccctgcagctgctg
aacgtgggcgaggaggatgacggcgagtaccgctgcctggccgagaactcactgggcagt
gcacgacatgactactatgtcaccgtggaggctgccccgtactggctgcacaagccccag
agccatctgtatgggccaggagagactgcccgcctggactgccaagtccaaggcaggccc
caaccagagatcacctggagaatcaacgggatccccgtggaggagctggccaaggaccag
aagtaccggatccagcgtggtgccctgatcctgagcaacgtgcagcccagtgacacaatg
gtgacccagtgtgaggccggcaaccggcacgggctcctgctggccaatgcctacatctac
gttgtccagctgccggccaagatcctgactgcagacaatcagacatacatggctgtccgg
ggcagcactgcctaccttctatgcaaggcctttggagcacctgtgcccagtgttcagtgg
ctggacgaggatgggacaactgtacttcaggacgaacgcttcttcccctatgccaatggg
accttgggcattcgggacctccaagccaatgacactggacgctacttctgccaggctgcc
aatgaccaaaacaatgtgactattgtggctaacctgcaaattaaagatgcaactcagatc
acccagggtccccggagcaccattgagaagaaaggttcgagggtgaccttcacgtgccag
gcctcctttgacccctccttgcagcccagcatcacctggcgtggggacggccgagacctc
caggagcttggggacagtgacaagtacttcatagaggacgggcgcctggtcatccacagc
ctggactacagcgaccagggcaactacagctgcgtggccagcaccgagctggacatggtg
gagagcagggcacagctcttggttgtggggagccccgggtcggtgccgcggctggcactg
tctgatctgcacctgctgaagcagagccaggtgcgcctgtcctggagtcctgcagaagac
cacaatgcccccattgagaagtatgacattgaatttgaggacaaggaaatggcacctgag
aaatggtacagtctgggcaaggtgccagggaaccagacctctaccaccctcaagctgtcg
ccctatgtccactacacctttagggttactgccatcaacaaatacggccccggggagccc
agcccggtctctgagactgtggtcacacctgaggcagccccggagaagaaccctgtgaac
gtgaagggggaaggcaatgagaccaccaatatggtgatcacgtggaagccgctccggtgg
atggactggaacgccccccaggttcagtaccgcgtgcagtggcgccctcaggggacacga
ggaccgtggcaggagcagattgtcagcgaccccttcctggtggtgtcaaacacgtccacc
tttgtgccctatgagatcaaagtccaggctgtcaacagacagggaaagggcccagagccc
caggtcaccattggctactccggagaggattatccccaggcagtccctgagctggaaggc
attgagatcctcaactcaagcgccgtgctggtcaagtggcggccagtggacctagtccag
gtcaagggtcacctccgaggatacaatgtaacgtactggagggagggcagtcagagaaag
cacagcaagaggcacacccacagagaccatgtggtggtgcccgccaacaccaccagcgtc
atcctcagtggcttgcgaccctatagctcctaccacctggaggtgcaggcctttaacggg
cggggattggggcccgccagcgagttcaccttcagcaccccagagggagtgcctggccac
cccgaggcgctgcacgtggagtgccagtcgaacaccagtctgcggctgcactggcagccc
ccactcagccacaatggcgtgctcaccggctatgtgctctcctaccgccccctggatgag
gggggcaaggggcagctgtccttcaaccttcgggaccctgaacttcggacacacaacctg
accgatcttagtccccacctgcggtaccgcttccagcttcaggccaccaccaaagagggc
cctggtgaagccattgtacgggaaggaggcactatggccttatctgggatctcggatttt
ggcaacatctcagccacagcgggtgaaaactacagcgtcgtctcctgggtccccagggag
ggccagtgcaacttcaggttccatatcttgttcaaagccttgggagaagagaagggcggg
gcttatgtcagctacagccagagctcctacacgcagggggacctgcagcctgacactgac
tatgagatccacttgtttaaggagagaatgttccagcacaggatggctgtgaaaaccaat
ggcacaggccgcgtgaggctccctcctgcggggtttgccactgagggctggttcattggc
tttgtgagcgccatcattctcctgctcctccttctgctcattctctgcttcatcaagcgc
agcaagggcggcaaatactcagtgaaggataaagaggatacccaggtggactctgaggcc
cgaccgatgaaagatgagactttcggcgagtacaggtccctggagagtgacaatgaggag
aaggctttcggcagcagccagccctcgctcaatggagacatcaagcccctgggcagtgat
gacagcctggccgattatgggggcagtgtggatgttcagttcaatgaggatggctccttc
atcggccagtacagtggcaagaaggagaaggaggtggcagggggcaacgacagctcaggg
gctacctcccccatcaaccctgctgtggccctagaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (9)   
   RefSeq(nuc) (5)   
   GenBank (2)   
   EMBL (2)   
Protein domain (11)   
   Pfam (11)   
All databases (48)   

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