KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100410015
Entry
100410015         CDS       T03264                                 
Symbol
PCGF5
Name
(RefSeq) polycomb group RING finger protein 5 isoform X1
  KO
K11489  polycomb group RING finger protein 5
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03083  Polycomb repressive complex
cjc04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    100410015 (PCGF5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    100410015 (PCGF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cjc03036]
    100410015 (PCGF5)
Chromosome and associated proteins [BR:cjc03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     100410015 (PCGF5)
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-C3HC4_4 zf-RING_5 zf-Nse zf-RING_10 zf-rbx1 zf-RING_6 TRAF3_RING
Other DBs
NCBI-GeneID: 100410015
NCBI-ProteinID: XP_009008201
Ensembl: ENSCJAG00000011001
UniProt: A0A2R8MLL4
Position
12:80631895..80754020
AA seq 253 aa
MATQRKHLVKDFNPYITCYICKGYLIKPTTVTECLHTFCKTCIVQHFEDSNDCPRCGNQV
HETNPLEMLRLDNTLEEIIFKLVPGLREQELERESEFWKKNKPQENGQDVTSKVDKPKVD
EEGDENQDYHRSDPQIAICLDCLRNNGQSGDNVVKGLMKKFIRCSTRVTVGTIKKFLSLK
LKLPSSYELDVLCNGEIMGKDHTMEFIYMTRWRLRGENFRCLNCSASQVCSQDGPLYQSY
PMVLQYRPRIDFG
NT seq 762 nt   +upstreamnt  +downstreamnt
atggctacccaaaggaaacacttggtgaaagattttaatccttatattacctgctatatc
tgtaaagggtatctgatcaagccaaccacagtgacagaatgcctccatacattctgtaag
acttgtattgttcagcactttgaagatagcaatgattgcccaaggtgtggcaaccaggtt
catgagacaaatccattagaaatgttgaggttggacaatactttagaggaaattatattt
aagctggtccctggactccgagaacaagaacttgagcgtgaatctgaattttggaagaaa
aataagcctcaagaaaatggacaagatgttacttcaaaagttgacaaaccgaaagtagat
gaagaaggtgatgaaaatcaagattatcacagaagtgacccacaaattgctatctgtcta
gattgtttacgaaataatggacaatcgggggacaatgtagtaaagggtttaatgaagaaa
ttcattcggtgttctacacgtgtaactgttggaactattaaaaaatttctaagtttaaaa
ctaaaacttccaagttcttatgagttggatgtgctgtgcaatggtgaaattatggggaag
gatcatactatggaattcatctacatgacaagatggcgactaagaggcgaaaactttcgg
tgtctgaactgctcagcttcgcaagtctgctctcaggatggccctttgtatcagtcgtac
cctatggtattgcagtatcgaccaagaattgattttggttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (11)   
   RefSeq(nuc) (7)   
   GenBank (2)   
   EMBL (2)   
Protein domain (12)   
   Pfam (12)   
All databases (48)   

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