KEGG   Callithrix jacchus (white-tufted-ear marmoset): 100413170
Entry
100413170         CDS       T03264                                 
Symbol
GTF2F1
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X2
  KO
K03138  transcription initiation factor TFIIF subunit alpha
Organism
cjc  Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cjc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100413170 (GTF2F1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cjc03021]
    100413170 (GTF2F1)
Transcription machinery [BR:cjc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     100413170 (GTF2F1)
SSDB
Motif
Pfam: TFIIF_alpha
Other DBs
NCBI-GeneID: 100413170
NCBI-ProteinID: XP_008985308
Ensembl: ENSCJAG00000016669
Position
22:complement(5645426..5659864)
AA seq 516 aa
MAALGPSSQNVTEYVVRVPKNTTKKYNIMAFNAADKVNFATWNQARLERDLSNKKIYQEE
EMAESGAGSEFNRKLREEARRKKLGIVLKEFRPEDQPWLLRVNGKSGRKFKGIKKGGVTE
NTSYYIFTQCPDGAFEAFPVHNWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQR
RLKDQDQDEDEEEKEKRGRRKASELRIHDLEDDLEMSSDASDASGEEGGRAPKAKKKAPL
AKGSRKKKRKKGSDDEAFEDSDDGDFEGQEVDYMSDGSSSMEEPETKAKVPQQEEGPKGV
DEQSDSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSDESDSSEESDIDSEASSAL
FMAKKKTPPKRERKLSGGSSRGNSRPGTPSTEGGSTSSTLRAAASKLEQGKRVSEAPAAK
RFRLDAGSQSLSGKSTPQPPSGKSTPSSGDVQVTEDAVRRYLTRKPMTTKDLLKKFQTKK
TGLSSDQTVNVLAQILKRLNPERKMINDKMHFSLKE
NT seq 1551 nt   +upstreamnt  +downstreamnt
atggcggccctaggccccagcagccagaatgtcactgaatacgtcgttcgagttccgaag
aatacaaccaaaaaatataacatcatggcttttaatgcagctgataaagtcaactttgcc
acgtggaatcaggcccggctggagcgggacttgagcaataagaaaatctatcaagaggag
gagatggctgagtcaggcgcgggcagcgagttcaaccgcaagctccgggaggaggctcgg
aggaagaaactcggcatcgtcctcaaggagttccggcccgaggaccagccctggctgctc
cgtgtcaacggcaaatctggcaggaagttcaagggcatcaagaagggaggcgtgacagaa
aacacgtcctactatatcttcacccagtgccccgacggggcctttgaggccttccccgtg
cacaactggtacaatttcacgccgctggcccggcaccgcacgctcactgctgaggaggcc
gaggaggaatgggagaggaggaacaaggtgctaaaccacttcagcatcatgcagcagcgg
cggctcaaggaccaggaccaggacgaggacgaggaggagaaggagaagcgcggccgcagg
aaggcgagcgagctgcgtatccacgacctggaggatgacctggagatgtcgtccgatgcc
agtgacgccagcggtgaggagggtggcagagcccccaaggccaagaagaaggcgccgctg
gccaagggcagcaggaagaagaagaggaagaagggctcagatgacgaggccttcgaggac
agtgatgatggggactttgagggccaggaggtggactacatgtcggacggctccagctcc
atggaagagcctgagaccaaggccaaggtgccgcagcaggaggaggggcccaagggcgtt
gatgagcagagcgacagtagtgaggagagtgaggaggagaagccacctgaggaggacaag
gaggaggaggaggagaagaaggcgcccaccccacaggagaagaagcgcaggaaagacagc
agcgatgaatcagacagctcagaggagagtgacattgacagtgaggcctcctcggccctc
ttcatggcgaagaagaagacaccacccaagagagagcggaagctgtcgggagggagctca
aggggcaacagccgcccgggcacgcccagcacagagggcggcagcacgtcctccaccctg
cgtgccgctgccagcaaactcgagcaagggaagcgggtgagcgaggcgcctgcagcgaag
cggttccgtctggacgcggggtcccagagcctgtcggggaagtcgactccgcagccacca
tcgggcaagtcgacacccagcagtggggacgtgcaggtgactgaggacgccgtgcgccgc
tacctgacacggaagcccatgaccactaaggacctgctgaaaaaattccagactaagaag
acagggctgagcagcgaccagacggtgaacgtgctggcccagatcctcaagcgcctcaac
cccgagcgcaagatgatcaacgataagatgcatttctccctcaaggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (25)   
   RefSeq(nuc) (3)   
   GenBank (11)   
   EMBL (11)   
Protein domain (1)   
   Pfam (1)   
All databases (49)   

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