KEGG T01854: CJSA

Campylobacter jejuni subsp. jejuni IA3902: CJSA_1404

Entry

CJSA_1404 CDS T01854

Definition

(GenBank) putative recombination protein RecB

K03582

exodeoxyribonuclease V beta subunit [EC:3.1.11.5]

Organism

cji Campylobacter jejuni subsp. jejuni IA3902

Pathway

cji03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:cji00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CJSA_1404
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cji03400]
    CJSA_1404
Enzymes [BR:cji01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CJSA_1404
DNA repair and recombination proteins [BR:cji03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CJSA_1404

SSDB

Motif

Pfam:

UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_12 Viral_helicase1 PDDEXK_1 AAA_30 Lig_C

Other DBs

NCBI-ProteinID:

ADC29040

Position

complement(1413357..1416122)

AA seq 921 aa
MSQFEPFLALEASAGSGKTFALSVRFVALILKGARINEILALTFTKKAANEMQKRIIETF
LNLEKENKTSECNELCKLLGKDKEELISLRDAKKEEFLRTELKISTFDAFFGKILRVFAL
NLGLSSDFTMSEERLDVREIFLKLLKKDELKDLAYYINLVDEKENFFNELEKFYENAYFQ
NRPKILNPTKAYINKAYSELRSYCLGLTHVKNYKNLCDNFKSEVLDLSVFMQSSFMTKFE
STKYLQDLESTNLHFSAKRMELINALNTYAIELENYKIANLMNLLNHYSEAKNIFHKDKN
TLNFQDVSKKVYELITSEFKDMIYFRLDGFISHLLIDEFQDTSVIQYQILRPLIAELVSG
EGVKKNRTFFYVGDKKQSIYRFRKGKKELFDLLKQEFSQIKSDNLNTNYRSKELLVDFVN
ETFKEKIKDYKEQFALESKKGGFVRIVESKEQKVKNQAQEIKEKTLETLFEQINFLRSKN
ISYDDICILCWKNSDADMVLDFLREQNIPAFTQSNVLLENKASVRLVLEYAKYCIFGDEF
YLVFLKELLGFEPRKITLDFSKNAMENVLFLIKELKLDLNDIALIQFIEYAKTKENFLKL
LFEPCALKIVSEQNMGISIMSVHKSKGLEFDHVILLDSLSKNNSNNEDIMLEYDINQGWQ
LHIKDKIRELTKEPIYTLFKENITRANYEDDINKLYVAFTRAKESLIIIKRNEESVNGNY
PSYFKGGFLNIHSQERGFLESKEQILSVKKESIQTLQKFEKITLQEIQSEERLDSKELYF
GNAFHFFMQNLKLPKGENFQILTQRCKSKFRHFLDESDFEKLFKRIEILLKNIQFQNLIG
DGKLLKEQALSFNGEIKQLDLLALKDEEAFIIDYKTGLAMQDKHKEQVGTYKIAISEILQ
KDKVRAFIVYCLENEIQILEI

NT seq 2766 nt +upstreamnt +downstreamnt
atgagtcaatttgagccttttttagcattagaagcgagtgcaggaagcggaaaaaccttt
gccctgagtgtgcgttttgtagcacttattttaaaaggagctaggattaatgaaatttta
gctttgacttttaccaaaaaagctgctaatgaaatgcaaaaaagaattattgagactttt
ttaaacttagaaaaagaaaataaaaccagtgaatgcaatgaactttgcaagcttttaggt
aaagataaagaagagcttatttctttaagagatgctaaaaaagaagaatttttaagaaca
gagttaaaaatcagtacttttgatgcttttttcggaaaaattttgcgtgtttttgcttta
aatttgggcttaagtagtgattttacaatgagtgaagagaggcttgatgtaagagagatt
tttttaaaacttcttaaaaaagatgaattaaaagatttggcttattatattaatttagtt
gatgagaaagaaaatttttttaacgagcttgaaaaattttatgagaatgcttattttcaa
aatcgtcctaaaattctaaatccaactaaagcttatatcaataaagcttatagtgagtta
agaagttattgtttgggtcttactcatgtaaaaaattataaaaatttgtgtgacaatttc
aaaagtgaagttttagatttatccgtgtttatgcaatcaagttttatgacaaaatttgaa
agtacaaaatatttacaagatttagaaagtactaacctgcattttagtgcaaaaagaatg
gagcttataaatgctttaaatacctatgccatagagcttgaaaattataaaattgctaat
ttaatgaatcttttaaatcattatagtgaagctaaaaatatatttcataaagataaaaat
accttaaatttccaagatgtgagtaaaaaagtttatgagttaataaccagtgaatttaag
gatatgatttattttcgtttagatggttttatttcgcatttgcttattgatgaatttcaa
gatacaagcgtgatccaatatcaaattttacgccctttgatcgctgagcttgtttcagga
gaaggggttaagaaaaatcgcacttttttttatgtaggagataaaaaacaaagtatttat
cgctttcgtaaaggaaaaaaagaattatttgatttgttaaaacaagaatttagtcaaatt
aaaagtgataatttaaatactaattatcgttctaaagagcttttggttgattttgttaat
gaaacttttaaagaaaaaatcaaagattataaagaacaatttgccttagaaagtaaaaaa
ggcggttttgtgcgtattgtggagtctaaggaacaaaaggttaaaaaccaagcccaagaa
attaaggaaaagactttagaaactttatttgagcaaattaattttttaagatctaaaaat
atttcttatgatgatatttgtattttgtgttggaaaaatagtgatgcagatatggttttg
gattttttaagagagcaaaatattcctgcatttactcaaagcaatgttttacttgaaaat
aaagcaagtgtaagacttgttttagaatatgctaaatattgtatttttggtgatgagttt
tacttggtatttttaaaggaacttttaggttttgagccgagaaaaattacccttgatttt
tcaaaaaatgctatggaaaatgtactttttttaataaaagaattaaaacttgatttaaat
gatatcgctttaatacaatttatcgaatatgctaaaactaaggagaattttttaaagctt
ttatttgagccttgtgctttgaaaatagtaagcgaacaaaatatgggaattagtattatg
agtgtgcataaatctaagggtttggaatttgatcatgtgattttacttgatagtttatct
aaaaacaattcaaacaatgaagatatcatgcttgaatatgatatcaatcaaggttggcaa
ctccatattaaagataaaattcgagagcttactaaagagcctatttatactctttttaaa
gaaaatattacaagagcaaattatgaagatgatattaataaactttatgtggcttttaca
agagctaaggaaagtttgatcatcataaaaagaaatgaagaaagtgtaaatggaaattat
ccaagttattttaaggggggatttttaaatatacattctcaagagagaggttttttagaa
agcaaagaacaaattttaagcgttaaaaaagaaagcattcaaactttgcaaaaatttgaa
aaaattaccttgcaagaaattcaaagtgaagaaaggcttgatagtaaagaactatatttt
ggaaatgcttttcacttttttatgcaaaatttaaaacttcctaagggtgaaaattttcaa
atacttactcaaagatgcaagagtaaatttagacattttttagatgagagtgattttgaa
aagctttttaaaagaattgaaattttacttaaaaatattcaatttcaaaatttgattggt
gatggaaagcttttaaaagaacaagctttgagttttaatggagaaattaaacaattagac
ttgcttgctttaaaagatgaagaagcttttataattgattataaaacaggtcttgctatg
caagataaacataaagagcaggtaggaacttataagatcgccattagtgaaattttgcaa
aaagataaagtgcgtgcttttatagtttattgtttggaaaatgaaattcaaattttggaa
atataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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