KEGG   Coturnix japonica (Japanese quail): 107317287
Entry
107317287         CDS       T04297                                 
Symbol
TNR
Name
(RefSeq) tenascin-R isoform X2
  KO
K06252  tenascin
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo04510  Focal adhesion
cjo04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107317287 (TNR)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    107317287 (TNR)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:cjo00536]
    107317287 (TNR)
Glycosaminoglycan binding proteins [BR:cjo00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   107317287 (TNR)
SSDB
Motif
Pfam: fn3 Fibrinogen_C EGF_Tenascin Pur_ac_phosph_N EGF_2 Lzipper-MIP1 DUF1192
Other DBs
NCBI-GeneID: 107317287
NCBI-ProteinID: XP_015725284
Position
8:complement(4787721..4835347)
AA seq 1355 aa
MGTDSDNPVLRNVLISFNLLLLGAVLKPFECRLEVTTEPAERPAVDEEGGLANCSPPIKE
QPMVFHHIYNINVPADSCCSSMLRSSAEEVSSEDDRLAEYTEQTSDSESQVTFTHRINLP
KQACKCSTSLPSLQELLSRIEMLEREVSMLRDQCNSNCCQENAATGRLDYTLPCSGHGNF
SLESCRCVCSEGWAGSNCSEPRCPRGCSSRGVCLEGQCVCDNDYGGEDCSQLRCPAGCGS
RGLCVDGECICEEGFGGEDCSQPRCPRDCSGRGHCDNGTCVCIEGYAGEDCGWLRCPNAC
SGRGVCQDGLCVCEDGYGGQDCSAVAPPENLRVTGISDSSIELAWDSPGAATEYVVSYQP
AGPGGSQLQQRVPGDWSTISITELEPGVAYNVSIYAVISDVLSSPVTTKVTTNLATPQGL
KFKTITETTVEVQWEPFSFPFDGWEISFIPKNNEGGVIAQLPSTVTTFNQTGLKPGEEYT
VTVVALKDQARSPPASDSISTLIDGPTQILVRDVSDTVAFVEWTPPRARVDAILLKYGLA
DGEGGRTTFRLQPPLSQYSLQALRPGARYHLAVSALRGANESQPALAQFTTEIDAPKNLR
VGSRTPASLELTWDNSEAEAHSYRVVYSTLAGEHYHEVLVPRDTGPTTRATLADLVPGTE
YGIGISAVMDSQQSVPATMNARTELDSPRDLLVTASTETSISLSWTKAMGPIDHYRVTFT
PASGMASEVTVSRNESQLTLSELEPGTEYTISIIAERGRQQSLEATVDAFTGVRPITQLH
FSQLTSSSVNITWSDPSPPADHLVLTYSPRDEEAAQQLALDGTRRHASLTGLRPSTEYLV
SLVAVHGAVSSEPVTGSITTGMDAPKDLRASNITQDSMVIYWSPPVAPFDHYRISYRAAE
GRTDSTAIGSDATEYTIRLLQPATKYEIGVKSVRGREESEVASITTYTAMDAPLGVTATN
ITPTEALLQWNPPLMDVESYVLILTRHTVAGETILVDGINQEYQLTNLQPSTTYTVAMYA
TNGPLTSQTISTNFTTLLDPPTNLTASEVTRRSALLSWVPPVGDIENYILTYRSTDGSRK
ELIVDAEDTWIRLEGLSETTEYTVHLQAAQNAMRSGFISTTFTTSGRVFANPQDCAQHLM
NGDTLSGVYTISINGDLSQRVQVFCDMNTDGGGWIVFQRRQNGLTDFFRKWADYRVGFGN
LEDEFWLGLDNIHKITSQGRYELRIDMRDGQEAAYAYYDKFSVGDSRSLYKLRIGDYNGT
SGDSLTYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGINW
YHWKGHEFSIPFVEMKMRPYNHRNITGRKRRSLQL
NT seq 4068 nt   +upstreamnt  +downstreamnt
atggggactgacagtgacaacccagtcctgagaaacgtgctcatcagcttcaacctgctg
ctcttgggtgctgtcctgaagccgtttgagtgccggctggaggtgacaacagagccagcc
gagaggccggcagtggatgaggaggggggcctggccaactgcagcccacccatcaaagag
cagcccatggtcttccatcacatctacaacatcaacgtccccgcggacagctgctgctcc
tccatgctcaggtcttcggctgaggaggtgagttcagaagacgacaggctggcggagtac
acggagcagacctccgacagcgagagccaggtcaccttcacccacaggataaacttgccc
aagcaggcctgtaagtgctccacctccctcccgtccctgcaggagctgctgagcaggatt
gagatgctggagagagaggtctccatgctccgggaccaatgcaactccaattgctgtcaa
gaaaatgcagccacaggacgcctggattacaccttaccgtgcagcggccacgggaacttc
agcctggaatcgtgccgctgcgtctgcagcgagggctgggctggcagcaactgctccgag
ccgcgctgcccgaggggctgctccagccgtggggtctgcctggagggtcagtgcgtctgc
gacaacgattacggcggtgaggattgctcccagctccgctgccccgccggctgcggctcc
cgcgggctctgcgtggatggagaatgtatctgcgaggagggattcggtggggaggactgc
tctcaaccccgctgcccccgtgactgctcgggaaggggacactgtgacaacggcacctgc
gtgtgcatcgagggctatgctggggaggactgcgggtggctgcggtgtcccaatgcctgc
agtggacgaggtgtctgccaggatggcctctgcgtctgcgaggatggctacggagggcag
gactgctcggcagtggctcctcctgaaaacctgcgagtgacagggatcagcgacagctcc
attgagctggcatgggacagccccggggcagcaactgagtatgtggtatcataccagcca
gcggggccagggggatcccagctccagcagcgggtgcctggggactggagcaccatctcc
atcacggagctggagccaggtgttgcctacaatgtcagcatctacgcagtcatcagtgat
gtcttgagcagccctgtcaccaccaaggtgacaaccaacttggccacgccgcaggggctg
aagttcaagaccatcacagagacaacagtggaggtgcagtgggagcccttctccttccct
tttgatggctgggagatcagcttcatccccaagaacaacgagggtggtgtgattgcccag
ctccccagcactgtcaccaccttcaaccagacgggcctgaagccaggcgaggagtacact
gtcaccgtggtggctctgaaggatcaagccaggagccccccagcctctgacagcatctcc
accctcatcgacggcccaacgcagatcctggtgcgggacgtctccgacacagtggccttt
gtggagtggacaccaccacgtgcccgggtggacgccatcctgctgaagtacgggctggcg
gatggggagggcgggaggaccaccttccgcctgcagccccccctcagccagtactccctg
caggccctgcggcccggcgcccgctaccacctcgctgtcagtgccctccggggtgccaac
gagagccagccggcccttgcccagttcactacagagatcgatgcccccaagaacctacgg
gtgggctcaaggacccctgccagcctcgagctcacctgggacaacagcgaggcagaggca
cacagctatagggtggtctacagcaccctggctggagagcactaccacgaggttctggtg
ccacgggacactggccccaccacccgggccactcttgcagatctggtgccagggacagaa
tatggcattgggatttcagccgtgatggacagccagcagagcgtgccagcgaccatgaat
gccaggacagagcttgatagcccccgggacctcctggtgacggcttccacggagacatcc
atctcgctgtcctggaccaaagccatgggtcccattgaccactaccgtgtcaccttcacc
cctgcctcggggatggcctctgaggtgacggtgtcccgtaatgagtcacagctcactctc
tctgagctggagccagggacagagtataccatctccatcattgctgagaggggacgtcag
cagagcctggaggccactgtggatgctttcacaggagtccggcccatcacgcagctgcac
ttctcccagctgacatcctcaagtgtgaacatcacgtggagtgacccatccccacctgca
gaccacctggtcctcacctacagcccccgggatgaggaggcagcacagcagctggcactg
gatggcacccgtaggcatgccagcctgacgggtctgcggccatccactgagtacctggtg
tccctggtggctgtccatggcgcagtcagctctgagcccgtcacaggctccatcacaaca
gggatggatgcaccaaaggacctcagagcgagcaacatcacccaggactccatggtcatc
tactggagccctcctgttgctccctttgatcactacagaatatcctaccgtgctgctgaa
gggaggacagacagcacagccattggcagtgatgccaccgagtacaccatccgccttctg
cagcctgccaccaagtatgagattggagtgaagagtgtgcggggccgggaggagagcgag
gtggcctccatcaccacatacacagccatggatgctccgctgggtgtcaccgccaccaac
atcacccccaccgaggcactgctgcagtggaacccgccgctgatggatgtggaaagctac
gtcctcatcctcacccgccacacagttgcaggagaaacaattctggtggatggaatcaac
caggagtatcagctgaccaaccttcagcccagcaccacttatacggtcgccatgtatgcc
accaatgggcccctcaccagccagaccatcagcaccaacttcacaacccttttggatcct
ccaacaaacctgactgccagtgaggtcacccgacggagtgcactgctttcctgggtgcct
cccgtgggagacattgagaactacatcctgacctacagatcaactgatggaagtcgcaag
gagctgattgtggatgctgaggacacatggatccgcctggagggtctttctgagaccacc
gagtacaccgtgcacctgcaggctgcccaaaatgccatgcggagtggcttcatctccacc
accttcaccacaagtggccgtgtctttgccaaccctcaggactgtgcccagcacttgatg
aacggagacacactgagtggtgtctacaccatctccatcaacggggacctcagccagcgg
gtgcaggtgttctgtgacatgaacacagatggcggaggctggattgtcttccaaaggcga
cagaatgggctgactgacttctttcgaaaatgggcagattacagggttggctttgggaac
ttggaggatgagttttggttgggcttggacaacatccacaagatcacgtcgcagggacgt
tacgagctgcgcatagacatgagggatggccaggaagcagcatacgcctactatgacaaa
ttctccgttggtgactcccggagcctctacaagcttcggataggagactacaatggcact
tctggggactccctcacctatcaccagggccgccccttctccaccaaggacagggacaac
gacgtggccgtgaccaactgtgccatgtcctacaagggggcctggtggtataagaactgc
caccggaccaacctcaacggcaagtatggagagtcccggcacagtcagggaattaactgg
tatcattggaaaggccacgagttctccatccccttcgtggaaatgaaaatgcgaccttac
aaccaccgtaacatcactgggaggaagcgacggtccctacagctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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