KEGG   Comamonas kerstersii: B5M06_00645
Entry
B5M06_00645       CDS       T04758                                 
Name
(GenBank) RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
cke  Comamonas kerstersii
Pathway
cke03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cke00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B5M06_00645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cke03019]
    B5M06_00645
Enzymes [BR:cke01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     B5M06_00645
Messenger RNA biogenesis [BR:cke03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     B5M06_00645
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UvrD-helicase AAA_22
Other DBs
NCBI-ProteinID: AQZ96992
UniProt: A0A0W7Z352
Position
137196..139133
AA seq 645 aa
MTFEELNLAPAIVKAVLEQGYENPTPIQAQAIPAVLTGKDLLAGAQTGTGKTAAFSLPIL
HRLTQGGTQRPAGGIRALILTPTRELAAQIEENIRSYAKYLDVTSAVIFGGVGMKPQIDR
INKGVDILVATPGRLLDLQQQGFMDLSSVEVLVLDEADRMLDMGFIHDVKKVLALVPENK
QSLLFSATFSDEIRALANGLLKNPESIQVTPRNTTVQRIKQVIHPVGRNKKKDVLLHIIR
ENNWSQVLVFTRTKFGANHVAEFLTQNGISAMALHGNKSQSARTQALLGFKTGELRALVA
TDIAARGIDIDELPHVVNYEIPNVPEDYVHRIGRTGRAGREGYAVNLVCMDEEGFMMEIE
RFTKQEIPVVPMPEFGPEPGEKAEPIAMGRQTIWGGAGKPPSREVMQAAARAARQEMMER
IRSTKATQGERAGRGRRNPRGEAAAPDAENGAPLEQAPRRGNGPRRTPRQGMAPRHRQSD
ATSFEQTADIQSADAAVALPAEQGAGERTERDAQPRRRNGQGYNRSRQRPSRDNPRSAAP
AESQPARPARAPRPARNAYGDEPLSRFEDQPPRPNAHLGTQLGNPVTRAPRSHSSGQPDP
TLTSIDLMMERPRRGNGGGFRGGNGGGGFRGGNNRRGGNGGGFNR
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgacatttgaagaactgaacttggcacccgccattgtgaaagcggtgctggaacagggt
tacgaaaacccaacccccattcaggcacaagcgattcctgctgtgctgacaggcaaagac
ctgctggccggtgcgcaaaccggcacaggcaaaaccgctgccttctcgctgcctatcctg
caccgcctcacacagggcggcacacagcgcccagcaggtggcattcgcgccctgatcctc
actcctacccgtgaactggctgcgcagattgaagaaaacatccgctcctacgccaagtat
ctggacgtcacctctgccgtgatctttggcggcgtcggcatgaagccccagatcgaccgc
atcaacaagggcgtagacattctggtggccacacccggccgtctgctggacctgcagcag
caaggcttcatggacctgtccagcgtagaagtgctggtgctggacgaagccgaccgcatg
ctggacatgggctttatccacgacgtgaagaaggtgctggccctggtgcccgagaacaag
cagagcctgctgttttccgccactttcagcgatgaaatccgcgccctggccaacggcctg
ctcaagaaccctgagagcattcaggtcacaccccgcaacaccacggtgcagcgcatcaag
caggtcatccaccctgtgggccgcaacaagaaaaaggatgtgctgctgcacatcatccgc
gagaacaactggagccaggtactggtgttcacgcgcaccaagttcggcgccaaccatgtg
gctgagttcctgacccagaacggcatctctgccatggctctgcacggcaacaagagccag
agtgcacgtacacaggcactgctgggcttcaagaccggcgagctgcgcgcgctggtggcc
accgacattgctgcacgtggcattgacatcgacgagctgccacacgtagtgaactacgaa
atccccaacgtacccgaagactacgtgcaccgcattggccgtaccggccgcgccggtcgc
gaaggctatgccgtgaacctggtgtgcatggacgaagaaggcttcatgatggagatcgag
cgctttaccaagcaggaaatccccgtcgttcccatgcctgaatttggccctgagcctggt
gaaaaggcagagcccatcgccatgggccgccagacgatctggggcggcgctggcaagcca
cccagccgcgaagtcatgcaggctgccgcacgtgctgcacgccaggagatgatggaacgc
atccgctccaccaaggctacccagggtgagcgcgctggccgtggtcgccgcaatccacgt
ggtgaagctgctgcacctgatgcagaaaacggcgctccactggagcaggcccctcgtcgc
ggcaacggccctcgccgcacacctcgccaaggcatggcacctcgccatcgccagagcgat
gccaccagctttgagcagacagcagacatccagtctgcagatgcagccgtcgcactgcca
gccgagcaaggcgctggcgaacgcacggagcgcgatgcacaaccccgccgccgcaatggc
cagggctataaccgctcgcgccagcgtccttcgcgtgacaatccacgcagcgctgccccc
gcagaaagccagcccgcacgtcctgcacgcgcgccacgtcccgcacgcaatgcgtatggc
gatgaaccgctgagccgctttgaagaccagccaccacgccccaatgcacacctgggcacc
cagctgggtaaccctgtcacccgtgcgcctcgctcgcacagcagcggccagcctgacccc
acactgaccagcattgacctgatgatggagcgcccacgccgtggcaatggcggcggcttc
cgtggcggcaatggcggcggaggcttccgcggcggtaacaaccgtcgtggtggcaacggc
ggcggcttcaaccgctaa

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