KEGG   Caldicellulosiruptor acetigenus 6A: Calla_1727
Entry
Calla_1727        CDS       T01600                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
clc  Caldicellulosiruptor acetigenus 6A
Brite
KEGG Orthology (KO) [BR:clc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:clc02048]
    Calla_1727
Enzymes [BR:clc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Calla_1727
Prokaryotic defense system [BR:clc02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Calla_1727
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII DEAD HSDR_N_2 SNF2-rel_dom DUF2113 SGS
Other DBs
NCBI-ProteinID: AEM74316
UniProt: G2PTN5
Position
complement(1810232..1813441)
AA seq 1069 aa
MFYKLDEEHYVENPFLFQLQRLGWKIYRQNKDNPEDTKEIISFTSSLEPEYGESQRFRES
FKEVILEGVLRKSLKRINPWIEDDQISEVVRRITTPQSNSLLEANKEIHDLLLENTSVSE
NRKTGEKSPTVKFIDFKNPHNNSFIAISQFKVNITGTEKHIVPDIVLFVNGLPLVVVECK
SPAVADPISEAITQLMRYCNRRGAIEGNEKLFWYNIFVVATSNQIAKYGTITSEYEHFVE
WKDPYPFSLSDVNPDGNVTSQQVLIHGMLSKENLLDLLHTFTIFKEDPKSKMIKVVARYQ
QFRAVKKMIKRLKESKTPDERGGIVWHTQGSGKSLTMMFMVRELYHNPEFGNYKVVFVTD
RRDLEKQLNETSRSVGFTVKLARSIQELKELLKTDTPELVMAMVHKFQERELKGEFPVLN
TSPNILIMIDEAHRTQYKLLGANLRKALPNATKIAFTGTPIEKTEMTFGDYIDKYSIKQA
VEDGVTVEIVYEGRVHSAELSDEEAANAKFEDVFKDADKDTKRMIMGRFTWRAYLEAEEV
IRDKARDMIQHYITHIFPNGFKAQVVTVSRLAAIRYKKALEEALKEKIYELEKENNSKID
LETLKKLEVGVVISGAQNDPPEYHPYTDPNEHERIIKSFKLPFDKVDENGISGNVGILVV
QNMLITGFDAPVEQVMYLDNVIKGHNLLQAIARVNRVYKNKSCGFVVDYVGVLKHLKEAL
AIYADEDIEEISEVVKNKAKSIDELKYVHNLIKEFFEKYGIRNWRQNVDECIDILVDEQV
RNEFIALVRWFNRCMDEVLPDPAALKYLTDLKILAFIKESARNRYRDDKLSIKDASNKIR
EIVEEYLISQGIDPKIPPTPLFEDKFLEKLHKKSSKAKAQELQHAIIEYIDEHWEEDPEL
YERFSDRLKRLLEEYKENWDAQCIELEKLREELKKGREAEQTFGLDPKKEMPFFGLLKDQ
IFGKKPVSELSDSEIDFLVSTTRDLVELISREVQAVDFWESATKQRKLKSYIISHLLEKI
SPAMYENNHDGVKTETAVYISNSSSQNIFNKRNEIAQRLLELAYHHYRK
NT seq 3210 nt   +upstreamnt  +downstreamnt
atgttttacaaacttgacgaagaacattatgttgaaaatccattcctctttcagcttcaa
aggcttggatggaagatttatagacaaaacaaagataaccctgaagatacaaaagaaata
atatcgttcacttcttcattagaacctgaatatggtgaaagccaaagattcagagaaagc
tttaaagaagtaatccttgagggagttttaaggaaatctttaaagagaataaatccttgg
atagaagatgaccaaataagtgaagttgttcgaagaattacaacaccacagtcaaactct
cttttagaggcaaataaagaaatccacgacttgcttttagagaacacctcagtttctgaa
aatagaaaaacaggagaaaaaagcccaactgttaagtttattgattttaaaaatccgcac
aataattcattcattgctatatcacagtttaaagtgaatataacgggaactgaaaaacat
attgttcccgatatagttctttttgtaaatggtttgcctcttgtggtggttgaatgcaaa
tctccagcagttgctgacccaatttctgaagcaattactcagcttatgcgctattgtaat
agacgcggcgcaattgagggaaatgaaaagcttttctggtacaacatatttgtagtagct
acgtccaatcagattgcaaagtatggcacaataacctcagagtatgagcactttgttgag
tggaaagacccttatcctttttcgctgtcagacgtaaatccagatggaaatgtaacaagc
caacaagttttgattcatgggatgctttcaaaagaaaaccttcttgatttgcttcacaca
ttcaccatctttaaagaagatccaaaaagcaaaatgataaaggttgttgcaaggtatcag
caatttagagcagtaaagaagatgataaaaaggttaaaagaaagcaaaacaccagacgaa
agaggaggaattgtttggcatacacaaggctctggtaaatctttgacaatgatgtttatg
gttcgagagctttatcacaatcctgagtttggaaactacaaagttgtttttgtcacagat
agaagagatcttgaaaagcagttaaatgaaacatcaagaagtgttggatttactgttaag
ttagcaagaagcattcaggagcttaaagaacttttaaaaactgatacacccgaacttgtt
atggctatggttcataaatttcaagagagggaattaaaaggagaatttcctgtcctcaat
acatcacctaatattctaattatgatagatgaagcacatagaacacaatacaagctgctg
ggtgcaaatttaagaaaagctcttccgaatgcaacaaaaatagcatttacaggcacacct
atagaaaagacagagatgacatttggcgattacatagacaagtacagcataaagcaggca
gttgaagatggtgtgactgttgagattgtatatgaagggagagtacatagcgcggagctt
tcagacgaagaggcagctaatgcaaagtttgaagatgttttcaaagatgctgacaaagat
acaaaaagaatgataatgggaagattcacatggagagcgtatcttgaagctgaagaagtt
atccgtgacaaagcaagagatatgatacagcactatataacccatatatttccaaatgga
tttaaagctcaagttgttacagtgtctcgtcttgctgcaataagatataaaaaagcgctt
gaagaggctctcaaagaaaagatttatgagttagaaaaagaaaataattcaaaaatagat
ttagaaacattgaaaaagttagaggttggtgtggttatttcaggagctcagaatgatcca
cctgagtatcatccttatactgaccccaatgagcacgaaaggataatcaaaagttttaaa
cttccatttgacaaagtagatgaaaatggtatcagtggcaatgttggtattttggttgtt
caaaatatgctgataactggttttgatgcacctgtagagcaggttatgtatcttgataat
gtgattaaaggacataacttgctacaagctattgcaagggtgaatagagtatacaaaaat
aagtcttgtggttttgttgtagattatgtaggtgttttgaaacatttaaaggaagcgctg
gctatttacgctgatgaagatattgaggagatttcagaggttgtaaagaacaaagcaaag
agcattgacgagctaaagtatgttcacaatcttattaaagagttttttgaaaaatatgga
attagaaactggcgtcagaatgtagatgaatgcatcgacattcttgttgatgagcaggtc
agaaatgaatttatagctcttgtaagatggtttaaccgttgtatggacgaagttctgcct
gaccctgcagcactaaaataccttactgacctgaaaattcttgcttttataaaagaatcc
gctcgaaatagatacagagatgacaagctgagtataaaagatgcaagcaataaaataaga
gaaattgtggaagaatacctgatctctcagggaatagatcccaaaataccacctactcca
ctttttgaagataaatttctcgaaaaacttcacaaaaaatcaagcaaggcaaaagctcaa
gagcttcagcatgcgataattgaatatattgatgagcattgggaagaagacccagaactt
tatgagagattttcggatagactaaagaggctgcttgaagaatataaagaaaattgggat
gctcaatgtattgaattagaaaaattaagagaagagttgaaaaaaggaagagaagcagaa
caaacttttgggcttgatcctaaaaaagaaatgccgttttttgggttactaaaagaccaa
atatttgggaaaaaacctgtaagtgaactttctgatagcgaaatagattttcttgttagc
acaacaagagatttggtagaattaataagcagagaggttcaagcggttgatttttgggaa
agtgcaacaaaacaaagaaagttgaaatcctatataatttcgcatttgctggaaaaaatc
tcacctgctatgtatgaaaacaaccatgatggagttaaaacagaaactgcagtttatatc
tctaattcttccagtcaaaatatattcaacaagagaaatgaaatagctcaaagactttta
gaacttgcttatcatcattacaggaagtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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