KEGG   Campylobacter lari NCTC 11845: UPTC3659_1268
Entry
UPTC3659_1268     CDS       T03552                                 
Name
(GenBank) UvrD/REP family helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
cln  Campylobacter lari NCTC 11845
Pathway
cln03420  Nucleotide excision repair
cln03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cln00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    UPTC3659_1268
   03430 Mismatch repair
    UPTC3659_1268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cln03400]
    UPTC3659_1268
Enzymes [BR:cln01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     UPTC3659_1268
DNA repair and recombination proteins [BR:cln03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     UPTC3659_1268
   MMR (mismatch excision repair)
    Other MMR factors
     UPTC3659_1268
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_11 PcrA_UvrD_tudor AAA_12 CarD_TRCF_RID
Other DBs
NCBI-ProteinID: AJD02101
UniProt: A0A0A8HXA0
Position
1270100..1272163
AA seq 687 aa
MSFFEGLNDSQKEAIMHIDGAMLILAGAGSGKTKTITTRLAYLIDHVGIPAQNTLTLTFT
NKAANVMKTRALALLQDQNLHNPLLCTFHKFGLLFLRLYSERINRANNFVIIDTDDKKKI
LKDLASENLQSSLASIGAYISNFKNQSKSAQEIRKELEFLKDEKNKNYEEIIHLYEQYEY
FLIQNNFMDFDDLLMLTNKILEDEQFAKEQSQKYTYITVDEYQDTNALQYQILKKLCTSH
ENICVVGDDDQSIYGWRGAKIENILNFKEQFNNVKLVKLEQNYRSTSAILQAANELIEHN
RKRLGKTLICTKDEGEEITILQNDDEKIESFKVAREVLKLLNSGINPSEIAILYRVNALS
RALEEAFSKEKIPFKLLSGIRFYERAEIKDIISYLRLLSNLNDDYSFKRIINRPKRNFGN
ASLEKLENYAKENHLSLFESLCALQGSRFFSKKTDKELEKFILSIHKIKEKDDLLAMILA
LEEEFKIKEFYKDNPESEDKLLNIDELYANLKDKITHGNYNGLDDILNEISLLNEQDGLD
KESICIMSIHASKGLEFDYVFIIGLEEGFFPLTSESSNIEEERRLAYVAITRAKKKLYLS
YTNSRFYKGSRTRLEKSRFFGESNVIKKELTLDHQKNCYKKGDLIKHKIFGIGRVTGVSK
IGAEEKLTINFGGIERMIMSSFVEKVI
NT seq 2064 nt   +upstreamnt  +downstreamnt
atgagcttttttgaaggtttaaatgatagccaaaaagaagctatcatgcatattgatgga
gccatgttaatactagcaggcgcaggtagtggaaagactaaaaccatcaccactaggctt
gcttatttaatcgatcatgtaggcattcctgcgcaaaatacccttacactaacctttaca
aataaagctgctaatgtaatgaaaacaagagccttggcacttttacaagatcaaaattta
cacaatccccttttatgcacttttcataaatttggcttgttatttttaagactttatagc
gaaagaattaatagagcaaataattttgtcattattgatacagatgataaaaagaaaata
ctaaaagatttagctagtgaaaatttgcaaagctctttagcaagcataggtgcttatatt
tcaaattttaaaaatcaaagcaaaagtgctcaagaaatacgcaaagaattagaattttta
aaagatgaaaaaaacaaaaattacgaagaaatcattcatttatatgaacaatatgaatat
tttttaatccaaaataattttatggattttgatgatttactcatgctaactaataaaatt
ttagaagatgaacaatttgcaaaagagcaaagtcaaaaatatacttatataacagtagat
gagtatcaagataccaatgctttacaatatcaaattctaaaaaaactttgcacgtctcat
gaaaatatttgcgtggtgggtgatgatgatcaaagtatttatggttggcgtggggctaaa
atagaaaatatcttaaatttcaaagagcaatttaacaacgtaaaattagtcaaattagag
caaaactaccgctcaactagcgctattttgcaagctgcaaatgagcttatagagcataac
agaaaaagattaggaaaaactttgatttgcaccaaagatgaaggcgaagaaattacaatt
ttacaaaatgatgatgaaaaaattgaaagttttaaggtcgcaagagaagttttaaaactt
ttaaactcaggaattaatcctagtgaaatagccatactttatagagtaaatgctctatct
cgtgctcttgaagaagcttttagtaaagaaaaaattccttttaaattgctaagcggaatt
cgtttttatgaaagagctgaaattaaagatattatttcttatttaagattactttcaaat
ttaaatgatgattattcttttaaacgtattatcaaccgccctaaaagaaattttggtaat
gcaagtttagaaaagctagaaaattatgccaaagaaaatcatttatctttatttgaaagt
ctatgtgctttgcaaggaagtagattttttagcaaaaaaacagacaaagaattagaaaaa
ttcatactaagcatacacaaaatcaaagaaaaagatgatttacttgcaatgattttagcc
ttagaagaagaatttaaaatcaaagaattttataaagataacccagagagcgaagataaa
cttttaaacatagatgaactttatgctaacttaaaagataaaatcactcatggaaattat
aatggcttagatgatattttaaatgaaatttctttactcaatgagcaagatggacttgat
aaagaaagtatttgtattatgagtattcatgcaagcaaaggacttgagtttgattatgtt
tttatcataggcttagaagaaggattttttccactcactagcgaatcaagcaatatagaa
gaagaaagaagacttgcttatgtagcaatcactagagccaagaaaaaactttacttaagc
tatactaattctagattttataaaggaagtcgcacaagattagaaaaaagtagatttttt
ggcgagagtaatgtaatcaaaaaagaattaacactagatcaccaaaaaaattgctataaa
aaaggcgatttaatcaaacataaaatttttggcataggcagagtcactggggtaagtaaa
ataggcgctgaagaaaaactcacgattaattttggaggtatagaaagaatgataatgtca
agttttgtggaaaaagtgatatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system