KEGG   Cobetia marina: BFX80_01505
Entry
BFX80_01505       CDS       T04789                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
cmai  Cobetia marina
Pathway
cmai03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cmai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BFX80_01505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmai03400]
    BFX80_01505
Enzymes [BR:cmai01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     BFX80_01505
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BFX80_01505
DNA repair and recombination proteins [BR:cmai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BFX80_01505
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N Zn-ribbon_8
Other DBs
NCBI-ProteinID: AOM00238
Position
337915..338730
AA seq 271 aa
MPELPEVETTRRGIAPLVEGQEVTEVIVRQPRLRTPVPSELAEWLVGQRFGELSRRAKYL
LLPIADGHLLWHLGMSGSLRLVPIGTPPRTHDHVDVVLGNGQVLRYHDPRRFGFVDFVRG
DPHADTRLARLGPEPLSDAFTGELLFARSRKRRVAIKPFLMDNANVVGVGNIYASEALFM
AGIDPRRPAGETSLEEYERLAEASRSVLAAAIEQGGTTLRDFVGGDGKPGYFAQRLNVYG
RGGEPCRECGHEIMSLVLGQRASCFCPHCQS
NT seq 816 nt   +upstreamnt  +downstreamnt
atgcccgaattaccggaagtcgagacgactcgccgtggtatcgcaccattggtcgagggc
caggaggtcaccgaggtgatcgtgcgtcagccacggctgcgcacgccagtaccgagtgag
ctggcggagtggctggtggggcagcgtttcggtgagctctcgcgccgtgccaagtacctg
ctgttgccgatcgccgatggccacctgctctggcatctgggcatgtccggcagtctgagg
ctggtacccatcggcacgccgccccgtacgcatgaccatgtcgatgtggtgctgggcaat
ggccaggtgttgcgctatcacgacccgcgtcgcttcggtttcgtcgacttcgtgcgcggt
gacccgcacgctgacacacgtctggcgaggctcgggccggagcccttgtcggacgccttc
accggtgagcttctcttcgcgcgctcgcgcaagcgacgcgtggcgatcaagcctttcctg
atggacaacgccaatgtggtcggcgtgggcaacatctacgccagtgaggcgctcttcatg
gccggcatcgacccgcgtcgtccggcgggggagacctccctggaggaatatgagcgcctc
gccgaggcctcacgcagcgtgctggcggccgccatcgagcaaggcggtaccaccttgcgt
gatttcgtcggtggtgatggcaagcccggctacttcgcccagcgcctcaacgtctatggg
cgagggggcgagccctgccgcgagtgtggccatgagatcatgagcctggtgctcgggcag
cgtgccagttgcttctgccctcattgccagagctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (22)   

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