KEGG   Cucurbita maxima (winter squash): 111497744
Entry
111497744         CDS       T05246                                 
Name
(RefSeq) DNA mismatch repair protein MSH6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    111497744
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmax03400]
    111497744
DNA repair and recombination proteins [BR:cmax03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     111497744
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor LBR_tudor
Other DBs
NCBI-GeneID: 111497744
NCBI-ProteinID: XP_023004430
UniProt: A0A6J1KUJ2
Position
Unknown
AA seq 1304 aa
MSSSRRTSNGRSPLVNQQRQITSFFTKKSTGENSTDKTNRDSHFNSSPTLNPSPSTNSPS
SVQSKRKKTPLVIGGAASSSPGPSPIAHFKENSYGDGVVGKRIKVYWPLDKSWYEGRVKM
FDEKDGKHLVQYDDAEEESLVLGNEKIEWVEESEKKLKRLRRGSSSPMNAAVVEDIEEDL
NDGDASDDSRDEDWGNGKNVENEVSDEEDLELVEEDEEDENEDDGVGKSRRKQGGNLESK
KRKMSNGGKVVGSPKKSKSSGGNLPSGLSSVEPKIKSDRVNVLNGMNEIVNDALERFNTR
EAEKFRFLKEDRKDANKRHPGDPDYDPRTLYLPPHFLKNLSDGQRQWWEFKSKHMDKVLF
FKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSMNVEKLARKGYRVLVIEQT
ETPEQLERRRKEKGSKDKVVKREICAVVTKGTLTEGEMLSLNPDASYLMAVTEKFHGLES
QSAERILGVCVVDVATSRIILGQFGDDAECSALCCLLSELRPVEIIKPSKLLSPETERVL
LTHTRNPLVNELVPLLEFWDAEKSVHEVKRLFKGIANRSFPGSSTEENLLNDDVPGEKDG
LGYLPDVLSELMNALENGSWALSALGGILFYLKQAFLDEALLRFAKFELLPCSGFNDVIS
KPYMVLDAAALENLEIFENSRNGGSSGTLYSQLNHCVTAFGKRLLKTWLARPLYHVESIK
ARQGAVASLRGDNLSYSLEFRKALSKLTDMERLLARIFASSEANGRNATNVVLYEDAAKR
QLQEFISALRGCELMLQACSSLRVILENVESRRLDCLLTPGEGLPDLQSVLSHFKDAFDW
GEANSSGRIIPREGVDVEYDSACKKIKEIQSNLTKHLKEQRKLLGDTLITYVTVGKDTHL
LEVPESLQGSIPQNYELRSSKKGFFRYWTPNIKKLLVELSLAESEKESSLKSILQRLIGK
FCEHHLQWRQLVSAVAELDVLISLAIASDYYEGGVCQPLFSKSQCQKEVPRFSAKNLGHP
VLRSDSLGEGTFVPNDINIGGSSASFILLTGPNMGGKSTLLRQVCLSVILAQIGADVPAE
SFELAPVDRIFVRMGAKDQIMSGQSTFLTELSETALMLSSATRNSLVILDELGRGTATSD
GQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYCKDPRVSLYHMACRVGEGTGGVEEVTF
LYRLTPGTCPKSYGVNVARLAGLPNCVLTEAAAKSREFEATYGITGEESEENLCNHSWVD
GTVTLIQKLISLESTPRCNDETEKNGISSLKQLQQQARILVQQG
NT seq 3915 nt   +upstreamnt  +downstreamnt
atgtcatcatctcgtcgaaccagcaatggccgatcgccattggtaaaccaacaacgtcaa
atcacttccttctttaccaaaaaatccaccggagagaactctaccgataaaactaaccgt
gattcacatttcaattcgagtccgactttaaaccctagccctagcactaattctccttct
tctgtacagtctaagcgcaagaagaccccgttggtcatcggcggcgctgcatcttcttct
cccggtccttctcctatagctcatttcaaggagaattcgtacggggatggggttgttggg
aagagaataaaggtttattggccgttggataagagctggtacgagggtcgtgtgaaaatg
ttcgatgagaaggatgggaagcatctggtgcagtatgacgatgcggaggaggagtcactg
gtgttggggaatgagaagatcgagtgggttgaggaaagtgagaagaagttaaaacgattg
cgacggggttcttcatcgccgatgaatgcggcggtggtagaagatatcgaggaggatttg
aacgatggggacgccagcgatgattctagagatgaagattggggcaatggaaaaaatgtg
gagaatgaggtgagtgacgaggaggatttggagttggtggaggaagatgaagaagatgag
aatgaggacgacggggtgggcaagtcaagaagaaagcaaggtgggaatttggaatccaag
aagcgtaagatgagcaatggcgggaaagtggtaggatctccaaagaaaagcaagagtagc
ggtggaaacttgccttctgggctttcttcagtggagcctaagatcaaatccgatagggtg
aatgtcttgaatggaatgaatgaaattgtgaacgatgccttagaaaggttcaacacgcga
gaagctgaaaagttccgatttctaaaggaagacaggaaggatgcaaacaaaagacatcca
ggagatcctgattatgatccaagaactttgtatttgcctcctcatttcttgaagaattta
tcagatggtcagagacaatggtgggagtttaagtcaaagcacatggataaagttctgttt
ttcaagatggggaagttttatgaactttttgaaatggatgcacacgtaggagctaaggag
cttgatttgcaatatatgaagggagaacaacctcactgtggcttccctgagaagaacttt
tccatgaatgtggagaagttggcaaggaagggttatcgagttcttgttatagagcagaca
gaaactcctgaacagttagagagacgacgaaaggagaaaggttctaaggataaggttgtg
aaacgtgagatatgtgcagtagtcacaaaaggaacactaactgagggtgagatgctatct
ttgaatcctgatgcttcatatctcatggcagtaactgaaaaattccatggcttggaaagc
cagtcagcagaacggattttaggggtttgtgtggttgatgtggccaccagtaggattatc
cttgggcagtttggtgatgatgcggagtgcagtgctctgtgctgtcttttgtccgagctt
aggccagttgaaattatcaaaccttctaaactgctaagtcctgaaacggagagggtgcta
ctcactcatacgagaaatcctttagtgaatgagttagttccattattggaattctgggat
gctgaaaaaagtgttcacgaagtcaagagattgtttaagggcattgctaatcgatcattc
cctggatcgtctactgaagaaaatttactcaacgatgatgttcctggagaaaaagatggg
ttgggctacttgccagatgttttatctgagctaatgaatgcacttgaaaatgggtcttgg
gcactttcagctcttggaggaatccttttctatttgaagcaggctttcctggatgaggca
ttgcttagatttgcgaagtttgaattacttccttgttctggcttcaatgatgttatttca
aaaccctacatggttcttgatgcagctgccttggagaatctggagatctttgagaacagt
agaaatgggggctcttctgggacgctctattcacaactgaaccactgtgtaactgcattt
ggcaaaaggttacttaagacatggcttgcaagacctttatatcacgtagaatcaattaaa
gctaggcaaggtgctgtggcgagcctacggggagataacttatcttattctcttgagttt
cggaaagcattatccaaactcacagatatggagcgtttacttgctcgcatttttgctagt
agtgaggcaaatgggaggaatgcaacaaatgtggttctatatgaggatgcagcaaaaaga
caacttcaagagtttatatctgctttgcgtggttgtgagctcatgctccaagcatgttca
tcgcttcgtgtcattttggaaaatgttgaatcaagacgacttgattgcctattaacacct
ggtgaaggtcttcctgatctccagtcagttctcagtcatttcaaggatgcttttgattgg
ggtgaagccaatagttcgggacgtataattcctcgtgaaggtgtagacgtggagtatgac
tctgcttgtaaaaaaatcaaggagattcaatctaacttgacaaagcatttaaaggaacag
aggaaattacttggggatacattaatcacttacgtgacagtaggaaaagatactcatttg
ttggaagtgcctgaaagtttgcagggtagcattcctcagaattatgagttgcgatcttct
aaaaagggcttcttccggtactggactcctaatattaagaagttgttagttgagctttct
ctagctgaatctgagaaggagtcctcgctgaaaagcattttgcagaggttaattgggaaa
ttctgtgaacatcatctccagtggaggcaattagtctctgcagttgctgaacttgatgtt
ctgatcagcctagcaattgcgagtgattattatgagggtggcgtatgtcaaccacttttc
tcaaagtcacagtgtcaaaaggaagtgccacgtttttctgcaaaaaacttggggcatcct
gttcttagaagtgattcgttgggtgagggtacatttgtccccaatgacatcaatattggt
ggctcaagtgccagcttcattcttctgactggcccaaacatgggtggaaaatcgactctt
cttcggcaagtttgtttgtccgtcattctggctcagataggtgcagatgttcctgcagaa
agttttgagttagctcctgttgatcgaatatttgttcggatgggtgctaaggatcagatt
atgtctggtcaaagtacatttttgacagaactatcagaaactgcgctgatgttgtcatct
gctacccgtaattcattggtgatattggacgaacttggacgtgggacagcaacttcagat
ggacaggcaattgctgaatcagttcttgaacattttgttagcaaggtgcaatgcagggga
gtattctcaactcattatcaccgattagccttggcttattgtaaagatcctagggtttca
ttgtaccatatggcatgccgagttggagaggggactgggggcgtcgaagaagttacattt
ctctatcgtttgactcctggcacgtgtccgaaaagttatggagtgaatgttgcacggcta
gctggactcccaaattgtgtattaaccgaggctgcggctaaatcaagggagtttgaagct
acttatggtattactggagaagaatctgaagaaaacttgtgcaatcattcatgggtagat
ggtacagtaactttgattcaaaagttgatcagcctggaatcaaccccgagatgcaacgat
gaaacagagaagaatggtatcagttccttgaaacagcttcagcaacaagcaagaatactt
gtccagcaaggttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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