KEGG   Callorhinchus milii (elephant shark): 103173333
Entry
103173333         CDS       T03088                                 
Symbol
rnf168
Name
(RefSeq) E3 ubiquitin-protein ligase rnf168
  KO
K20779  E3 ubiquitin-protein ligase RNF168 [EC:2.3.2.31]
Organism
cmk  Callorhinchus milii (elephant shark)
Brite
KEGG Orthology (KO) [BR:cmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmk04121]
    103173333 (rnf168)
   03400 DNA repair and recombination proteins [BR:cmk03400]
    103173333 (rnf168)
Enzymes [BR:cmk01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     103173333 (rnf168)
Ubiquitin system [BR:cmk04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    103173333 (rnf168)
DNA repair and recombination proteins [BR:cmk03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Ubiquitin ligases
     103173333 (rnf168)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_UBOX Prok-RING_4 zf-C3HC4 zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-RING_2 zf-RING_5 CCDC50_N zf-RING_10 FliD_N Sina_RING DZR_2
Other DBs
NCBI-GeneID: 103173333
NCBI-ProteinID: XP_007884192
UniProt: A0A4W3IYR1
Position
Unknown
AA seq 618 aa
MADVPPSRAVTMRRSRSRTKRSGPSSPAASPVGAPEPPPLTRSECLCPVCQELLLEPVTP
PCGHSLCLDCFQKTVQISNLTCPLCRRRLSNWARRQARSGGLVNTALGKRIREQFRGESH
GAAEESRDIDRSWPTTHLSKPGEVRQEYEDQILKFKAERVAREEEEFRASENLIQKLMAE
EQQEKVLLEQRRKEVEEQLKKDEELAKKLSDKMNSASVRPPERTNIDTSLTGSKSTSSKV
TKGSNSTVHNSGHVGDIHRYFSPTTYSECPETRRQKSNASAVKTCDDLNSVTWFKEQSDE
YKLQKLPLQCSFQCEDSENTNETTEVQISEIKERVRFSEDALLTGTSINSTTSNGENGSL
LDSVSTPTLKSEVNNYYGSQTAKDKTVSNHTVTALKEQPIQVEGIENQTLKRPSIKLKEV
LKRKTFNSSEIPEETTFTPKKKRIYPCSDNNEFNEDLQVANEISYMEQHAEWEKEKCRLE
EQDRELALQLQRKFDRETTTINRQRGSPDEYQLRVKNPYPINSMGRPNQHQSNSLRNSNP
NSSQFGKKQKNAKNSKNVASRLSRPKRKPRATASQVSTQRSRHQKPLKCLDGNSAKLGHV
NRLKNKQQTLIEMIQKMN
NT seq 1857 nt   +upstreamnt  +downstreamnt
atggcggacgttcccccgagtcgagccgttaccatgaggcggagcaggtcgcggaccaaa
cgtagcggcccatccagtcccgcggcctcaccggtcggggctccggagccgccgcccctc
acccggtccgagtgcctgtgcccggtatgtcaggagctgctgctggagcccgtgaccccg
ccgtgcggccactcgctgtgcctcgactgcttccagaagacggtgcagatcagtaacctg
acctgcccgctctgccgccgccgcctctccaactgggcgcggcgccaggcccgctccggg
ggcctggtcaacaccgcgctgggcaagcgcatccgagagcagttcaggggcgagagtcac
ggagccgccgaggagtccagagacattgacagatcgtggccaacaacacatctaagcaaa
cctggtgaagttcgacaggagtatgaagaccagattcttaagttcaaagctgagcgtgtt
gctcgtgaagaggaggaattccgagctagtgaaaacttaattcagaaactaatggccgag
gagcagcaggaaaaagtgcttttggaacaacgcaggaaagaagtggaggaacagttgaaa
aaagatgaagaacttgctaagaagttgagtgacaaaatgaattctgcatctgtgaggcca
ccagaacgtacgaatattgatacaagtttgactggctcaaaatccacctcctcaaaagtc
accaagggaagcaattctactgtgcacaactctggccatgtgggagatatacatagatac
ttctctcccacaacatattctgaatgtccagagaccaggaggcagaagagcaatgcatct
gctgtcaaaacatgtgacgacttgaacagtgtaacttggtttaaagagcaaagtgatgaa
tacaaattgcaaaagttgcctctccagtgttcgtttcaatgtgaagattctgaaaataca
aatgagacaacagaggttcaaattagtgaaattaaagaaagagtgaggttctcagaagat
gcactacttacaggaacaagtataaattccactactagcaatggtgaaaatggaagtcta
ttggattctgtaagcaccccaactttaaaaagtgaagttaataattactatggttcacag
actgcaaaggacaaaacagtaagcaatcatacagttacagcattgaaagaacagcctatc
caagttgaaggtatagagaatcaaactttgaagcgaccttccattaaattgaaagaggtg
ttgaaaagaaaaaccttcaattcctcagaaatacccgaggaaactacgttcacacctaaa
aagaagagaatctatccttgttctgacaacaatgagtttaatgaagatctacaagttgct
aatgaaatttcctacatggagcaacatgcagagtgggagaaagaaaagtgtagacttgaa
gaacaggacagagaattagcattgcaactacagagaaagtttgatcgggagacgacaact
attaacagacagagaggatcacctgatgaatatcaactacgggtgaaaaacccatatcca
attaattctatgggcagacctaatcagcatcaatctaatagcttgaggaattcaaaccca
aattcatcacaattcggtaaaaagcaaaaaaatgccaaaaattcaaaaaatgtcgcctcc
aggttaagcagaccaaaaaggaaacctcgagccacagcaagccaagtttcgactcaaagg
tcccgacatcagaaaccacttaaatgcctggatgggaattctgcaaaattgggtcacgtc
aatagacttaaaaacaaacaacagactttgattgaaatgattcagaaaatgaattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (34)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (14)   
   Pfam (14)   
All databases (63)   

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