KEGG   Cucumis melo (muskmelon): 103494721
Entry
103494721         CDS       T03195                                 
Name
(RefSeq) periodic tryptophan protein 2
  KO
K14558  periodic tryptophan protein 2
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103494721
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cmo03009]
    103494721
Ribosome biogenesis [BR:cmo03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    103494721
SSDB
Motif
Pfam: WD40 Utp12 ANAPC4_WD40 NBCH_WD40 WD40_like eIF2A WDR54 Utp21
Other DBs
NCBI-GeneID: 103494721
NCBI-ProteinID: XP_008454272
UniProt: A0A1S3BZ00
Position
7:complement(28656413..28661794)
AA seq 892 aa
MNYRFQNLLGAPYRGGNVLISEDTLLISPVGNRISVTDLVKSQTTTLPLQSSSNICRIAL
SPDGVFLFTVDEKNRCLFINLRRRVVLHRISFKKPVSVVKFSPDGANIAVGTGKLVQIWR
APGFRKEFFPFELVRTFSDCHDKVTALDWSPDGNYLLAGSKDLTARLLIVKKLGGIKYKP
QLFLGHRDSIVGSFFGTNKKTNKVEKVYTITRDCYIFSWGVIQNNFDEMDVDNSEPASPG
TPRRDSEENVESGGDVSVKKRKNIGDGNVDSEDGYLLREKWQLVRKDNFSQAPAKVTACD
YHRYLDVVVVGFSNGVFGLYQMPDFVCLHMLSISREKITTAIFNQHGNWLSFGCAKLGQL
LVWEWRSESYILKQQGHYFDVNCLAYSPDSQLLATGADDNKVKVWTVQSGFCFVTFSEHA
NAVTALQFLANNHCLLSASLDGTVRAWDLFRYRNFRTFTSPTSRQFVSLAVDQSGEVVCA
GTLDSFEIFVWSMKTGRLLDILSGHEGPVHGLMFSPTNAVLASSSWDKTVRLWDVFEGKG
AVETFNHMHDVLTVVYRPDGRQLASSTLDGQIHFWDPIDGILMYTIEGRRDIAGGRLMTD
RRSAATSSSGKCFTTLCYSADGSYILAGGSSKYICMYDIADQVLLRRFQITNNLSLDGVL
DILNSKNMTDAGPLDLIDDDDSDIEEGVDQQAREKLGHDLPGSLLNRGRPVVRTKCLRIA
PTGRNFAASTTEGVLIYSIDESFIFDPTDLDIDVTPEAINAALDEDQSSRALILSLRLNE
DLLIKKCIFSVNPVDIAKLIQSIPHRYLQRLVEALAEILESCPHLEFVLRWCQELCKVHG
TYIQQNSRNLLPALKSLQMAITRTHQDLADMCSSNEYLLRYLCSTSAKKETS
NT seq 2679 nt   +upstreamnt  +downstreamnt
atgaattaccggtttcaaaatctgttgggagcgccctatagaggcgggaatgttctgatt
tcagaggacactctgttaatctcacccgtcggtaaccgaatctccgttaccgaccttgtc
aagtctcaaacaacgactcttccccttcaatcatcttccaatatttgtcgtattgccctc
tcccccgatggggtatttttattcaccgtggacgagaagaatcgttgcctcttcatcaat
ctccgacgtcgagttgttcttcaccgtatttccttcaagaagcctgtcagtgttgtcaag
tttagccccgacggtgcaaatattgctgttggcactgggaaattggtgcaaatttggcgt
gcaccggggtttaggaaggaattttttccttttgaactggtaagaactttttctgattgt
catgataaagttacagcgttagactggagtcctgatggcaattacttgcttgctggctcg
aaggatttgactgctaggttacttattgtgaagaagttaggtgggattaagtataaacca
cagttgtttttgggtcacagagattcaattgtcggttcattttttgggactaataagaaa
actaataaggtagaaaaagtttatacgatcacacgagattgttatatttttagttggggt
gttatacagaataattttgatgaaatggacgtggataattctgaaccagcttcaccaggg
actcctaggagggatagtgaagaaaatgtggagagtggtggggatgttagtgttaagaag
aggaagaatattggtgatggtaatgtggatagtgaagatggatacttgcttagagaaaaa
tggcagttagtgaggaaggataatttttctcaggctccggcaaaggtgactgcgtgtgat
tatcataggtaccttgatgtggtggttgtgggattctctaatggtgtgtttgggctgtat
cagatgccggattttgtgtgcttgcacatgttgtcaatatcaagagagaaaattaccaca
gctattttcaatcagcatggcaactggttgtcatttgggtgtgcaaaacttggtcagtta
ctagtgtgggaatggcgttcggaaagctacatattgaaacagcagggacattactttgat
gttaattgtcttgcttattcaccagattcacaactattggcaactggagctgatgataac
aaagtcaaggtctggacggttcaatcaggcttctgctttgttacattctctgagcatgca
aatgctgttactgctctccagtttctggcaaataaccactgtctcttgagtgcatctctt
gatggtactgttcgtgcatgggatttgtttcgctatcgaaattttagaacttttacctcc
cctacttctcggcaatttgtttccttggcggtagatcaaagtggtgaagttgtttgtgct
ggaacattagattcatttgagatttttgtttggtcaatgaagactggtcgtttgttggat
atcctcagtgggcatgaaggtcccgttcatggattgatgttttctcctacaaatgcagtc
ttagcttcctcatcatgggataaaactgttcgcttgtgggatgtttttgaagggaaaggg
gctgttgaaacgttcaatcatatgcatgatgttcttactgtggtttatcgtccagatgga
aggcagttggctagctctacattagatggtcagatccatttttgggatcccattgatggt
atattgatgtacacaattgaagggcgtagggacattgctggagggcgtttgatgactgat
agaagatctgccgctacttcaagttcgggaaagtgcttcacgacattatgttattctgct
gatgggagttatatattagccggaggatctagtaaatacatctgtatgtatgacattgct
gatcaggtattgttgcggaggtttcaaataaccaataatctctctttagatggagttctt
gacattttaaattcaaagaacatgacagatgctggccccttagatttgattgatgacgat
gacagtgatatagaagaaggagttgatcaacaagcacgagagaaattaggccatgattta
ccagggtccttgctcaatcgtggacgaccagttgtaagaacaaaatgcttaagaattgcg
cctactggtcgaaattttgcagcatcaacaaccgaaggagttcttatttattcaattgac
gaatcttttatctttgatcctactgatcttgacatcgatgtcacacctgaggcaatcaat
gctgcacttgatgaagaccaatcgagcagggctttaattcttagtttgcgtttaaatgag
gatcttttaataaagaaatgcattttctctgtgaatcctgtggatattgcaaaactaatc
caatcgattccgcatagatatttgcagaggttagtggaggcattagcggaaattctggaa
agttgcccacatttggagtttgttctacggtggtgtcaggaactttgcaaagttcacggg
acttacatccaacaaaattctagaaacctacttcctgccttaaaatccttgcaaatggct
ataaccagaacacatcaggatttggctgatatgtgttcgtcgaatgagtatttacttcgg
tatctttgctcaacaagtgccaagaaggaaacaagttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (8)   
   Pfam (8)   
All databases (23)   

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