KEGG   Cucurbita moschata (crookneck pumpkin): 111447308
Entry
111447308         CDS       T05248                                 
Name
(RefSeq) structural maintenance of chromosomes protein 6B-like isoform X1
  KO
K22804  structural maintenance of chromosomes protein 6
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111447308
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     111447308
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 Sipho_Gp157 AAA_29 EzrA AAA_21 DUF948 UvrA_DNA-bind FliJ SbcC_Walker_B AAA_13 ABC_tran Baculo_PEP_C
Other DBs
NCBI-GeneID: 111447308
NCBI-ProteinID: XP_022942166
UniProt: A0A6J1FN31
Position
Unknown
AA seq 1052 aa
MADSRDLPPRRGAGIVKSIRLENFMCHSNLYIEFGEWLNFITGQNGSGKSAILTALCVAF
GCRARGTQRASTLKDFIKTGCSHAVIQVEMENSGEDAFKPGIYGNVIIIERRISEASGAI
VLKDSQGKKVSSRRDELRELVDHFNIDVENPCVIMSQDKSREFLHSGNDKDKFKFFFKAT
LLQQVDDLLKNIFHQLRSANALVDDLESTIRPVEKELNELQGKIKNMEHVEEIYQQVQQL
KKKLAWSWVYDVDKQLLDQSVKIGKLKDRIPICRAKIDHQQGLAEKLRERFIEKKAQIAS
MMEKTSEVRRLKDELQETLSLATREKLGLEEEHGRKMNYIQKMAKRVRLLEQQVHDVHEQ
HIRNTQAEESEIEEKLKELELETEAAKSTVMRLKEEENGLLDSLNSGRSEIKKIAEEIEG
YEKKHNEFSRSIRELRQHQTNKVTAFGGDRVIQLLRVIERQNRRFKKPPIGPIGAHLNLV
NGDVWAPAVENAIGRLLNAFIVTNHQDSLLLRGCANEANYRQLPIIIYDFSRPLLDIPAH
MLPQTKHPTTLSVIHSENHTVINVLIDKGDAERQVLVKDYDVGKSVTFDQRIKNLKEVFT
LDGYKMFSRGSVQTILPPVKRPRSGRLCSSFDDQIKSLEKDTSNMKEEAEQCRKRKRAAE
EQLRGLEENLCNAKRRCQNAERILMSKNLELQDLRKSQVAGTSSLPSSNVDELHQEISKI
KEEMEENKSLLEKFRVRMKDAEAKAKDLKLSFENLCESAKGEVDAYEEAERDMLQIERDL
HSAEKEMNHYEGIMTNKVLFDIKEAERQYEELERHRKESYSKASIISPESEIEALGDWDG
STPEQLSAQLNRLNQRLSNETRQCSESLEDLRMMYEKKERTIIRKQQTYKSFREKLNACQ
KALELRWNKFERNANLLKRQLTWQFNGHLRKKGISGHIKINYEEKTLSVEVKMPQDASSS
SVRDTRGLSGGERSFSTLCFTLALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALS
QGSQWIFITPHDIGVVKQGERIKKQQMAAPRS
NT seq 3159 nt   +upstreamnt  +downstreamnt
atggctgattccagggatcttcctcctcgccgcggagcaggaatagtcaaaagtatacgc
ttggagaacttcatgtgtcacagcaacttgtatattgagtttggcgagtggctcaatttc
attacagggcagaacggaagtggtaagagtgctatactgactgctttatgtgttgcattc
ggctgtcgagctagaggcacccaaagggcgtcgacgttgaaggattttattaaaactggt
tgcagtcatgctgtcatccaagttgaaatggaaaattctggggaggatgcttttaagcct
ggaatatatggtaatgttataatcatagagagaaggatttccgaagcctcaggtgccatt
gttttgaaagattctcaaggaaagaaggtttccagtcggagggatgaactacgagagctt
gtagaccattttaatatagatgttgagaacccgtgtgtgataatgagtcaggacaaaagt
agagagttcctgcattctgggaatgacaaagacaaattcaagttcttcttcaaagctact
cttctccagcaagttgatgatctgttgaaaaacatttttcatcaactgagatctgcgaat
gcacttgttgatgacttggagtctaccatacgacctgtggagaaggagctaaatgagctg
caaggaaaaattaaaaacatggagcacgtagaagaaatctatcaacaagtccaacagtta
aagaagaagcttgcgtggtcatgggtatatgatgtagacaagcagcttctggaccaaagt
gtaaaaataggaaagctcaaagatcgcatccctatttgtcgagcaaaaattgatcatcaa
cagggtctggcagaaaaattaagagaacgctttatcgagaagaaggctcaaattgcaagc
atgatggagaaaacttcggaagttagaagactgaaggacgaattgcaagaaaccctttcc
ttggcaacaagagagaagctcgggcttgaagaggagcatggccgcaaaatgaactacatt
caaaagatggcgaaacgtgttaggctgcttgagcaacaagttcacgatgttcatgagcag
cacataagaaatacacaggctgaagaatctgaaattgaggaaaagttgaaggaactcgaa
ttggagactgaagctgctaagtcaacagtcatgaggttaaaggaggaggaaaatggctta
ctggatagtctaaacagtgggagaagtgaaataaaaaagattgctgaagagattgaaggt
tatgaaaaaaagcataatgaattttcacgctctattcgagagctaaggcagcatcaaaca
aacaaggttacagcttttggaggtgatagagtcattcaattattacgtgtgattgagagg
caaaatcgaagattcaagaaacctcccattggtccaattggtgcccatctgaatttggtc
aatggtgacgtgtgggctcctgctgttgaaaatgccattgggaggttgctcaatgcattc
atcgtgaccaatcatcaagattctcttcttttgagaggatgtgctaatgaagccaattat
aggcaactcccaattatcatctatgacttttcaagaccactgttagatattccagctcac
atgcttcctcaaacaaagcaccctacaaccctttcagtgattcattctgaaaaccatact
gtcatcaatgttttgatagataagggtgatgctgagaggcaagtgcttgttaaagattat
gatgtgggtaaatcagtcacgtttgaccaacggatcaaaaatctcaaggaggtctttacg
ttagatggatataaaatgttttctcgtggttctgttcagacaattcttcccccagttaaa
agacctagaagtggcagactttgtagttcttttgatgaccagattaaaagtcttgaaaaa
gatacatcaaacatgaaggaagaagctgagcaatgtaggaagaggaagagagctgcagaa
gaacaacttcggggtcttgaagagaacctatgcaatgccaagcggagatgtcaaaatgcg
gaacgcattttaatgtccaaaaatttggagctacaagatttacggaagtcacaggttgct
ggaactagttcattaccttcatcaaacgttgacgagcttcatcaagaaatttctaaaatc
aaagaggagatggaagagaataaatcgcttctggaaaagttcagagtgagaatgaaggat
gcggaagccaaggcaaaagatcttaaactatcatttgagaatctgtgtgagtcagcgaaa
ggagaagttgatgcatatgaagaagccgagagagatatgttgcagattgaacgagatctg
cattctgccgaaaaggagatgaatcattatgaaggtattatgactaacaaggtcctgttt
gatatcaaagaggcagagagacaatatgaggagctcgagcgccatcgtaaggagagttac
agtaaggcttcaataatatctcctgagagtgaaattgaggctttaggtgattgggatggg
agcacacctgaacaactcagtgcacaattaaacaggctaaatcagagacttagtaacgag
acccgacaatgttctgaatctctggaagacttgaggatgatgtatgagaaaaaggagcgt
acaattataagaaaacaacagacttacaaaagttttagagagaagttgaatgcttgccag
aaagctcttgagctacggtggaacaagtttgaaaggaatgctaatcttttgaagcgtcaa
ttgacttggcaatttaatggccatttaagaaaaaaagggatcagtggacatataaaaatc
aattacgaggaaaagaccctctcggttgaggtgaagatgccccaagatgcatccagcagt
tctgttcgtgatacccgtggactttcaggtggagaacggtcattttccactctatgcttc
actttggcattacacgaaatgacagaagccccatttcgagcaatggatgagtttgatgtg
tttatggatgcagtaagtcggaaaattagcttagacactcttgtggattttgcattgtca
caaggttcccaatggatatttatcacacctcatgatatcggcgtggtaaaacaaggagaa
cgaatcaagaagcagcaaatggcagctcctcgatcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (14)   
   Pfam (14)   
All databases (26)   

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