KEGG   Chelonia mydas (green sea turtle): 102935860
Entry
102935860         CDS       T02989                                 
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM39
  KO
K12015  tripartite motif-containing protein 39 [EC:2.3.2.27]
Organism
cmy  Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmy04121]
    102935860
Enzymes [BR:cmy01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102935860
Ubiquitin system [BR:cmy04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    102935860
SSDB
Motif
Pfam: PRY SPRY zf-C3HC4_4 zf-B_box zf-RING_UBOX zf-C3HC4 zf-RING_2 zf-C3HC4_2 zf-C3HC4_3 zf-RING_5 zf-RING_10 SF-assemblin Fib_alpha zf-RING_6 DASH_Dad4 TRAF6_Z2 DUF4200 ApoLp-III AAA_11 zf-Nse TRAF3_RING CRIC_ras_sig zf-rbx1
Other DBs
NCBI-GeneID: 102935860
NCBI-ProteinID: XP_037770852
Position
14:complement(36066004..36087516)
AA seq 461 aa
MATAATAGEIQDEAICSICLGYLTEPVTIVCGHNFCRACITQYSEEKGTGTPLTCPQCRV
RFQKGEFKSNTQLNSIVQKIKHLGLKPGKGQKDYLCERHEERLKLFCEDDGETICWVCEK
SRDHKSHTVVPTEEAAQEYKVKLQGALGPLRKELEEALALTSKEKEKTTEWQGKVKNKRE
MIAGEFNKLHTLLREEEQLLLQSLEQEERETLKRLQKNVTKLSQQSSSLQQLITEIEEKC
QQPVVELLKDVKSTLSRSKNVKLQEPEAVSTDLKNVYKISLDMREALKRFGVDVTLDPDT
ANPHLVLSEDRKRVRHRDTHQDLPDKPERFDPCPCVLGAAGFAGGRRYWEVEVGDKTGWT
LGVCRESVSRKGKVTFTPEDGYWAMWQWYGEYAALTSPWTPLTVSVRPSRVGIFLDYGVG
KVSFYNVTDGSHLFTFTDTFSGMLRPYFNPGPTLGVETRLP
NT seq 1386 nt   +upstreamnt  +downstreamnt
atggccactgcagctacagcaggggaaatacaagatgaagctatttgctccatctgcctg
gggtatctgacggagccggtgactatcgtgtgtgggcacaacttctgccgagcctgcatc
acccagtacagtgaggagaagggaacggggacacccctgacctgtccccagtgcagagtc
cggttccaaaaaggggagttcaaatccaacacacagttgaacagcatcgtacaaaagatc
aaacacctgggtttaaaaccaggaaaagggcaaaaggattatctgtgtgagagacacgag
gaacgtctcaaactcttctgtgaggacgacggagaaactatttgctgggtgtgtgagaaa
tcccgggaccacaagtctcacactgtggttcccactgaggaggctgcccaggagtacaag
gtgaaactccagggagccctgggccctctgaggaaggagttggaagaggccctggctttg
acatctaaagagaaggagaaaacaacagagtggcaggggaaagtgaagaataagagagag
atgattgcaggtgaatttaacaaactgcacacactgctgagagaggaggagcagctgctt
ctgcagagcctggagcaggaggagagggagactctgaagagactgcagaaaaatgtaacc
aagctctcccagcaaagctcctctctgcagcagctgatcacagagatagaggagaagtgt
cagcaaccagttgttgagctgttaaaggatgtgaaaagcacattgagcaggagtaagaat
gtgaaactccaggaaccagaagctgtttctactgacctgaagaacgtgtataaaatttcc
cttgacatgagggaagcgctgaagagattcggagtggacgtgactctggatccagacacg
gcaaatccccacctcgtcctgtctgaggatcggaaacgtgtgagacacagagacacacac
caggatctgcccgacaaacccgagagatttgatccttgtccctgtgtcctgggcgctgcg
gggttcgcgggcgggaggcgttactgggaggtggaggtgggagacaagacaggctggact
ctgggggtttgtagggaatctgtgagcaggaaggggaaggtcacattcacacctgaggat
ggatactgggccatgtggcagtggtatggggaatacgcggccctcacatccccgtggact
cccctcaccgtgagcgtccggcccagccgggtggggattttcctggactatggggtgggc
aaggtctcgttttacaatgtgactgacgggtcccatctcttcactttcactgacaccttc
tccgggatgctccgcccttatttcaatcccggtccaacgctgggggtagaaacgcggctc
ccctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (23)   
   Pfam (23)   
All databases (38)   

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