KEGG   Chelonia mydas (green sea turtle): 102940296
Entry
102940296         CDS       T02989                                 
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
cmy  Chelonia mydas (green sea turtle)
Pathway
cmy03013  Nucleocytoplasmic transport
cmy03015  mRNA surveillance pathway
cmy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102940296 (EIF4A3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    102940296 (EIF4A3)
   03015 mRNA surveillance pathway
    102940296 (EIF4A3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmy03019]
    102940296 (EIF4A3)
   03041 Spliceosome [BR:cmy03041]
    102940296 (EIF4A3)
   03009 Ribosome biogenesis [BR:cmy03009]
    102940296 (EIF4A3)
   03012 Translation factors [BR:cmy03012]
    102940296 (EIF4A3)
Enzymes [BR:cmy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     102940296 (EIF4A3)
Messenger RNA biogenesis [BR:cmy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102940296 (EIF4A3)
   mRNA cycle factors
    Stress granule specific factors
     102940296 (EIF4A3)
Spliceosome [BR:cmy03041]
 Complex C
  Other components
   EJC/TREX
    102940296 (EIF4A3)
Ribosome biogenesis [BR:cmy03009]
 Eukaryotic type
  90S particles
   Helicases
    102940296 (EIF4A3)
Translation factors [BR:cmy03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    102940296 (EIF4A3)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 AAA_30 Flavi_DEAD TniB
Other DBs
NCBI-GeneID: 102940296
NCBI-ProteinID: XP_037752310
Position
3:202948519..202964043
AA seq 409 aa
MSGAAGAAGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPS
AIQQRAIKQIIKGRDVIAQSQSGTGKTATFCISVLQCLDIQVRETQALILAPTRELAVQI
QKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIK
MLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVK
RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANF
TVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYI
HRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq 1230 nt   +upstreamnt  +downstreamnt
atgtcgggcgcggcaggcgcggcgggctcggcccgcaagcggctgctgaaggaggaggac
atgaccaaggtggagttcgagaccagcgaggaggtggacgtgacccccaccttcgacacc
atggggctgcgcgaggacctgctgcgcggcatctacgcctacggttttgagaaaccatca
gctattcagcagagagccatcaaacagattatcaaaggaagagacgtgattgcacagtca
caatctggaacaggcaaaacagcaacattttgtatctctgttctacagtgtttagatatt
caggtccgtgaaacccaggcattgatcttagcaccaactagagagttggcagtacagatt
caaaagggccttcttgctcttggtgactacatgaatgtacagtgtcatgcctgtattgga
ggcacgaatgttggtgaagatatccggaaattggattacggacaacatgttgttgctggc
acaccaggccgtgtgttcgatatgattcgtcgtcgaagtttaaggactcgtgccatcaaa
atgttggttttggatgaagctgatgagatgctcaataaaggttttaaagaacagatttat
gatgtgtacagatacctgcccccagctactcaggtggttctaatcagtgctaccttgcct
catgaaatcctggagatgaccaataaattcatgactgacccaatccgcatcttggttaaa
cgtgatgaattaactctggaaggaatcaaacagttttttgtggccgtggaaagggaagag
tggaagtttgatacgctgtgcgatctgtacgacacactcactatcacgcaggctgtcatc
ttctgtaacaccaagaggaaggtagactggctaacggagaagatgagagaagccaacttc
acggtgtcctcaatgcatggtgatatgccacagaaggagagagaatccatcatgaaggag
ttcagatctggggcaagccgcgtgcttatttctacagatgtttgggccagggggttggac
gttcctcaggtgtccctgatcattaactacgacttgcccaacaacagagaactgtatata
cacagaattggtagatcaggtcggtatggcagaaaaggtgttgccatcaactttgtaaag
aatgatgacatccgtatcctgcgtgatattgaacagtactactctacccagattgatgag
atgcccatgaacgttgctgatcttatttaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (304)   
   KEGG ORTHOLOGY (1)   
   RefGene (300)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (325)   

Download RDF
DBGET integrated database retrieval system