KEGG   Cohnella candidum: EAV92_16975
Entry
EAV92_16975       CDS       T05696                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
coh  Cohnella candidum
Pathway
coh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:coh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EAV92_16975 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:coh03400]
    EAV92_16975 (uvrA)
DNA repair and recombination proteins [BR:coh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EAV92_16975 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EAV92_16975 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 RsgA_GTPase AAA_21 nSTAND1 BCA_ABC_TP_C AAA_22 nSTAND3 AAA_23 AAA_25 DnaJ_CXXCXGXG NACHT ATPase cobW Viral_helicase1 ExoX-like_C PRK
Other DBs
NCBI-ProteinID: AYQ74105
UniProt: A0A3G3K0P3
Position
complement(3711488..3714346)
AA seq 952 aa
MANESIVIKGARAHNLKNIDVTIPRDKFVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGKP
HCPDHGVEITSQTVEQMVDRIMEFPERTRLQILAPIVSGRKGEHQKLLADIQKQGFVRVR
VNGEIRDLSEKIELEKNKKHSVEVVVDRIVVKEDVAARLADSLETALKLSDGQVIVDVID
KEELLFNSKLACPICGFSIDELAPRMFSFNSPFGACPECDGLGAKMVIDPELLVPDRSKS
IDDGAFEAWAGSTSNYYPQFLAAVCAHYGIKTDVPVEKLSDKEMQIILYGTGGERVRFRY
ENEFGHTRDAQVPFEGVVHNLERRYRETGSEGIREFIEGYMSAKPCGKCKGQRLKRESLA
VTVGGENIAHVTSLSIGDASDFFDRLDLNEKEKAIANLILKEINSRLGFLVNVGLNYLTL
SRAAGTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDRLIRTLEHMRDLGNT
LIVVEHDEDTMLAADYIIDIGPGAGIHGGQVISQGTPKEVMDDEKSLTGAYLSGRKFIPV
PLERRKLSGKWLEVKGAKENNLKNLNAKFPLGVFTAVTGVSGSGKSTLVNEILYKTLARD
LNKAKVRPGEYKEFLGLEHLEKVIDIDQSPIGRTPRSNPATYTGVFDDIRGVFEMTNEAK
VRGYKKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYKG
KSIAEVLELTIEDATEFFVNIPRIHRKLQTLMDVGLGYMNLGQPATTLSGGEAQRVKLAA
ELYRRSTGKTLYILDEPTTGLHVDDIDRLLQVLHRLVDSGESVLVIEHNLDVIKTADYLV
DLGPEGGSGGGTIVATGTPEEVAKNPKSYTGKYLAPILERDRARTEASLAKV
NT seq 2859 nt   +upstreamnt  +downstreamnt
ttggccaacgagagtatcgtcatcaaaggcgcgagagcgcataacctcaaaaatatcgac
gtcacgatcccccgggataaattcgtcgtgctgaccggcctgtccggttccggcaaatcg
tccctcgctttcgacacgatttacgcggaagggcagcgccgttacgtggaatctctgtcg
gcttatgcgcggcaattcctcggacagatggacaaaccggatgtcgactcgatcgaggga
ttgtccccggcgatttccatcgaccagaaaacgacgagccgcaaccctcgctcgaccgtc
ggcaccgtcacggaaatttacgactacctgcgtctgctgtttgcccgcgtgggcaagcct
cactgcccggaccacggcgtggagatcacctcccagaccgtggagcagatggtcgaccgc
atcatggaattcccggagcgcacgcgcttgcaaattctcgctccgatcgtctccggacgc
aagggcgaacatcagaagctgctggccgatatccagaagcaaggattcgttcgggtccgc
gtgaacggagaaatccgcgatctctctgagaagattgaattggagaaaaataagaagcac
tcggtcgaggtcgtcgtcgaccggatcgtcgtgaaggaagacgttgccgcccggctggcg
gactccctggagacggcgcttaagctgtccgacggccaagtcatcgtggacgtgatcgac
aaggaagagctgctgttcaactccaagctcgcctgcccgatttgcggcttctccatcgac
gagctggcgccccggatgttctccttcaactcgccgttcggcgcctgtccggaatgcgac
gggctcggcgcgaagatggtcatcgatcccgaactgctcgtccccgaccgctcgaagagc
atcgacgacggcgcgttcgaggcttgggccggcagcacgtctaactactatccgcagttt
ttggcggcggtgtgcgcccattacggcatcaagacggacgtccccgtggagaagctctcc
gacaaggagatgcagatcattctttatgggacgggaggagaacgggtccggttccgctac
gagaacgaattcggccatacgcgcgacgcccaagtgccgttcgaaggcgtcgtgcacaac
ctggagcgccgctaccgcgagaccggctcggaaggcatccgcgaatttattgagggttat
atgagcgcgaagccttgcggcaagtgcaaaggccagcgcctgaagagagagtcgcttgcc
gtgacggtcggcggagaaaatatcgcgcatgtgacttcgctgtcgatcggcgacgcctcc
gacttcttcgaccgcctggatttgaacgagaaagagaaggcgatcgccaacctgatcttg
aaggaaatcaacagccggctcgggttcctggtgaacgtcggcctcaattatttgaccctg
tcgcgggccgccggcaccctgtcgggcggggaagcccagcgcatccggctcgccacgcag
atcggctcgagcctgatgggcgtcctctacatcctcgacgagccgagcatcgggcttcat
caacgcgataacgatcggctgatccgcacgctcgagcatatgcgcgacctcggaaacacg
ctgatcgtcgtcgagcacgacgaggatacgatgctggcggcagactacatcatcgacatc
ggacccggcgcgggcatccacggcggccaggtcatttcgcaaggaacgccgaaggaagtc
atggatgatgagaagtcgctgaccggcgcctatttgagcggtcgcaagttcattccggta
ccgctcgaacgccgcaagctcagcggcaaatggctggaagtgaaaggcgcgaaggagaac
aacctcaaaaacctgaacgccaaattcccgctcggcgttttcaccgcggtgacgggcgtg
tcgggatccggcaaatccacgctcgtgaacgagattctctacaagacgctggcgcgcgat
ttgaacaaggcgaaggtccgtcccggcgagtacaaggagttcctcggcctggagcatctg
gagaaagtcatcgacatcgaccaatcgccgatcggccggacgccgagatccaacccggcg
acttataccggcgtattcgatgatattcgcggcgttttcgagatgacgaacgaggcgaaa
gtccgcggctacaagaaaggccgcttcagctttaacgtcaagggcggcagatgcgaagcc
tgcaaaggcgacggcatcatcaaaatcgaaatgcacttcctgccggacgtctacgtgcct
tgcgaagtctgcaaaggcaaacgctacaaccgcgagacgctggaggtcaaatacaaaggc
aaaagcatcgccgaggtgctggagctgacgatcgaggacgcgacggagtttttcgtgaac
attccgcgcatccatcgcaagctgcagacgctcatggacgtcggcctcggctacatgaac
ctggggcagccggccacgacgctgtccggcggcgaagctcagcgcgtgaagctggcggcc
gaattgtaccgccgcagtaccggcaaaacgctgtacatcctcgacgagccgacgaccggc
cttcacgtcgacgatatcgaccgccttctgcaagtgctgcatcgattggtcgattccggt
gaaagcgtgctggtcatcgagcataacctcgacgtcatcaagaccgccgattacctggtc
gacttgggaccggaaggcggcagcggcggaggcacgatcgtggccaccggtacgccggag
gaagtcgccaaaaacccgaaatcgtacaccggcaaatacctcgcgccgatcctggagcgg
gatcgtgcccgcaccgaggcatcgctcgccaaggtataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (28)   

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