KEGG   Candida orthopsilosis: CORT_0F00260
Entry
CORT_0F00260      CDS       T02488                                 
Name
(RefSeq) Prp22 RNA-dependent ATPase
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
cot  Candida orthopsilosis
Pathway
cot03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CORT_0F00260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cot03041]
    CORT_0F00260
Enzymes [BR:cot01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     CORT_0F00260
Spliceosome [BR:cot03041]
 Complex C
  Other components
   Step II factors
    CORT_0F00260
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C HA2_N S1 DEAD AAA_22 AAA_19 ABC_tran nSTAND3 ATPase ResIII SRP54 T2SSE AAA_23
Other DBs
NCBI-GeneID: 14541479
NCBI-ProteinID: XP_003870385
UniProt: H8X8V7
Position
6:28604..31540
AA seq 978 aa
MTSTQNDQTKANLQREIVKKHLHLQDEESIRLTLDFLAELHRKSPSSFQGFDELVKHNGG
EDFDTAFLREIYNSLNSSSSESAKTDAAIAATDTLLGNVFEGRVISIRPYGAFIRFNNTS
GLCHISQVSYDGSRIAQIDLQPNQKVFVKVINEGRDNKGKISLSMRGINQKSGVDESQER
SKSNRTCEKRVTRPETHSTISSDKIHHEPEIETEIELNDARPSFLRNQEYAETNPSINTI
LSMEGAMSKAAENGSDFARKFREEKLQKEKEKNKASHQRIDPLAEKDKTEKVISEWKASH
KLSSFQNPTKRSIEEQKKSLPVYDMRGDLIQSIRDNQFIVIVGETGSGKTTQIVQYIYEE
GLNVINGESKIIGCTQPRRVAATSVAKRVSEEVGCDLGDEVGYNVRFDDKTTLKTKIKYM
TDGMLEREALTDPEMSKYAVIMLDEAHERTIATDVLFALLKKAALTNPNLKIIVTSATLD
SDKFSVFFNECPILNIPGRTYPVEVLYTKEPEMDYLSAALDTVMQIHISEPSGDILVFLT
GQEEIDTSCEVLAERVKVLGDVASELIILPVYSALPAEMQTKIFEPTPPGSRKVILATNI
AETSITIDGIYYVVDPGYVKLNAYDSKSGMDTLKISPISKAQANQRSGRAGRTGPGKCYR
LYTEQSYTNEMLPNTIPEIQRQNLSHTILMLKAIGIKDVIQFEFMDPPSKNSMMTSLEDL
YMLEALDDDGELTPLGRKMADFPMEPALAKTLIKSVDLNCTEEILTIVAMLSVQTIFHRP
KDRQNLADQRKARFHSTKGDHLTLLNVYNRWCASKYNKDWCRDNFIQERSMRHAKEVRKQ
LQTIMTKHKYSVNSCGPDLDAVRKTLCCGYFKNVAKRDSGEGYKTLSKNETVYLHPSSSQ
FGKNPEYLLYHAIVMTSREYMHHVTVIDPEWLCEFAPKYFKLADPHSQARKKQKIVPLES
FGNRNQKKPLGWWPGQKK
NT seq 2937 nt   +upstreamnt  +downstreamnt
atgacaagtactcagaatgaccagactaaggcaaacctacagcgagagatagtcaaaaag
catttacatcttcaggacgaagaaagtattagattgactttggattttcttgcagaatta
cacaggaaatcaccctcatcattccagggattcgatgagttagtcaagcacaatgggggc
gaggactttgatacagcctttttgagagaaatctacaactctctcaattcgagctcatca
gagagtgcaaagaccgacgctgctattgctgctacagatacgcttctcggtaatgtgttc
gaaggtagagtcatctccattcgtccctatggagcgttcatcagattcaacaacacctct
ggactttgccacatttctcaagtatcctatgacggatctagaatagcgcagatagatcta
cagccaaatcagaaagtgtttgttaaggtaatcaatgaagggcgcgataataaggggaaa
atatcgctttccatgaggggaattaaccagaaatctggggttgatgagtcacaggaaaga
agtaaatctaatagaacctgtgagaagagagtaacaagaccggaaactcattcgactatt
tcctcagataaaatacaccatgaaccggaaattgagaccgagattgaactaaatgatgcc
aggccatcttttttgagaaaccaagagtatgcggaaacaaacccctcaataaacacaatt
ttgagcatggaaggtgcaatgagtaaagccgccgaaaatggatctgattttgcgagaaaa
tttagagaggaaaagcttcaaaaggaaaaggaaaagaataaagctagccaccaacgaata
gatccccttgcagaaaaggacaagactgaaaaggtgatatcagagtggaaagcatctcac
aaactcagctcctttcaaaaccctacgaagcgttccattgaagagcagaaaaagtcactt
ccggtgtacgacatgcgaggcgatcttattcaactgattagagataaccagtttattgtc
atcgttggtgaaaccggttcaggaaaaactactcaaatagtgcagtacatttacgaagag
ggattaaatgtaatcaatggagaatcaaaaataatcggctgtacacagccaaggcgtgtg
gcagccacatcagtagctaaaagagtgtccgaagaggtaggttgtgatcttggcgatgaa
gtaggatacaatgttcgattcgatgataaaactacactcaagacaaagataaaatacatg
actgatggtatgttggaaagggaggctcttacggatccagaaatgagcaagtatgcggtg
ataatgttggacgaggcacatgagaggacaattgccaccgatgtactatttgctttgtta
aaaaaggcagcacttacaaatccgaatttgaagataattgtcacttcagctactttggat
tctgataagttttccgtgtttttcaatgagtgtccaattttgaacattcctggtagaact
taccccgtggaggtgctatacacaaaagagccagagatggattacttatcagcggctttg
gatacagttatgcaaatacacatttcggaacctagtggagatatattggtgtttttgact
ggacaggaggagattgacactagttgcgaagtacttgccgaacgagtgaaggtgttggga
gatgtagcctctgagcttattatcttacctgtctactcagcattaccagccgaaatgcaa
accaagatatttgagcccacgccgccaggatcgcggaaggtaattttggcaacaaacatc
gccgagacatcaattacaatcgatggtatatactacgtcgttgacccaggatacgtcaaa
ttgaatgcttatgattctaaactgggaatggacacactaaagatatctcccattagcaaa
gctcaagccaatcaacgaagcggaagagccggtagaactggaccaggaaaatgttaccgc
ttgtacactgagcagtcgtataccaatgaaatgcttccaaatacaatacccgaaatacag
agacaaaacttgtcgcatacaatcctaatgttgaaggcaattggtatcaaagatgttatc
cagtttgagtttatggaccctccttcaaaaaattcaatgatgacttcgttggaagatctt
tacatgttggaagcgttggatgatgatggagaactaactcctctaggacggaaaatggct
gattttcccatggagcctgcacttgcgaaaacactcatcaagtcggttgatttaaactgt
acagaagagattttaaccattgttgctatgctctctgtgcaaaccattttccatcgaccg
aaggataggcaaaatcttgctgatcagcgtaaggcaagattccactctaccaagggtgac
cacttgaccttgcttaatgtatataaccgttggtgtgcaagtaagtacaataaagattgg
tgtcgagataatttcatacaggagaggagtatgcgacacgctaaggaagttcggaagcaa
cttcaaacaataatgacaaaacacaagtattcagtgaactcatgtggccctgatctagat
gcagttaggaaaactttatgctgcggttactttaaaaacgtagctaaacgtgactccggc
gagggctataaaactttatcaaagaacgaaacggtttatctacatccgtcttcaagtcag
tttggaaagaatcctgaatatttattgtaccatgcaattgttatgacctcgcgtgaatac
atgcatcatgtcaccgtcattgatcccgaatggctttgtgaatttgctccaaagtatttt
aaactagctgatcctcacagtcaagccagaaagaagcaaaagattgtaccattagaatcg
tttggaaatcgtaaccaaaagaaaccattgggatggtggccaggtcagaaaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (28)   

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