KEGG   Carica papaya (papaya): 110819152
Entry
110819152         CDS       T05151                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
Organism
cpap  Carica papaya (papaya)
Brite
KEGG Orthology (KO) [BR:cpap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cpap03009]
    110819152
Enzymes [BR:cpap01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     110819152
Ribosome biogenesis [BR:cpap03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    110819152
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII RNA_pol_Rpc4
Other DBs
NCBI-GeneID: 110819152
NCBI-ProteinID: XP_021903930
Position
Unknown
AA seq 590 aa
MESSYPNKALTETRFSDLKPPLSEPVLEALSAEGFQFCTPVQAATIPLLCSFKDVAVDAA
TGSGKTLAFVVPLVEVLRRSSSYPPKPHQVMGIIISPTRELSSQIFNVAQPFVAPLANVK
GVLLVGGGDVKTDMKKIEAEGANLLIGTPGRLYDIMERMGILDFRSFEILILDEADRLLD
MGFQKQINYILSRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAETKTMHDSESA
QQLASSKTPSGLHLEYLECEADNKPSQLVDLLIKNKSKKVIVYFMTCACVDYWGVVLPQL
TILRGFSLIPLHGKMKQKAREKALASFAPLSSGILLCTDVAARGLDIPGVDCIVQYDPPQ
DPNVFIHRVGRTARLGREGNAIIFLLPKEEAYVEFLHIRRVHLQERKCTDDAVDVVSHIR
SGARKDRDVMEKGLRAFVSYIRAYKEHHCSYIFRWKELEIGKLAMGYGLLQLPSMPEVRN
HSLSTEGFTPVEDINLADIKYKDKSREKQRKKNLQAKKEKEEEKNSQKVSKTSKQTPTIM
KKKTAKQRRAAQTIEDEEELTREYRLLKKLKKGAIDESEYAKLTGIEELL
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggaatcgtcgtatcccaataaggcgttaaccgagacgcgcttctccgacctcaagccg
ccgctctccgaaccggtactggaagcactgagcgcagaagggtttcagttctgcacgccg
gttcaagctgctacgatccccttgctatgcagcttcaaggacgtagccgtcgatgccgcc
accggctccgggaaaaccctagccttcgttgtccccttggtagaagtcctgcgtcgatcc
tcctcttaccctccaaagcctcaccaggttatggggattatcatctcaccaacaagggag
ctatcctcgcaaatattcaacgtggcccagccatttgtagcgccgctggcaaatgtgaag
ggtgtgctgcttgttggaggtggagatgtgaagacagacatgaagaagatagaggcggaa
ggagctaatttgttgataggcactcctggcagattatatgatataatggagagaatgggt
atcttggattttcggagtttcgagattttgattttagatgaggctgataggctcttagat
atgggattccagaagcagataaattacattttatctcgcttaccaaagcttcgtaggact
ggtctgttttcagctacacaaactgaggctgttgaagagttatcaaaagcaggacttaga
aaccctgtaagggttgaagttcgagctgaaacaaaaacaatgcatgattcagaatcagcg
caacaattagcttcttctaaaacaccttcaggccttcatcttgagtatttagaatgtgaa
gcagataataaaccatctcaacttgttgatctccttatcaagaacaaatctaaaaaagtt
atagtatacttcatgacatgtgcctgtgttgattactggggagttgttcttccacaactt
actatcttgaggggtttctccttgattcctcttcatgggaaaatgaagcagaaagcaaga
gagaaagcactagcttcattcgctccactttcaagtggcatccttctatgtactgatgtt
gcagcacgtggacttgacattccaggagttgactgtatagtgcagtatgatcctcctcaa
gatccaaatgttttcattcacagagttggacgaacagctaggttaggtagagaaggaaat
gccattatttttctattgccaaaggaggaagcttatgtggaattcctgcacataagaagg
gttcatcttcaagaaagaaaatgcacagatgatgctgtggatgttgtctctcatattcga
tctggtgcaaggaaggaccgtgatgtcatggaaaagggactgagagcatttgtatcctac
atccgtgcatataaagaacatcactgctcttacattttcaggtggaaagaactcgaaatt
ggaaagttagccatgggatatggtcttttacagcttccatcgatgcctgaagtaaggaat
cactcactttctactgagggtttcactccagttgaggacataaatttggcagacatcaag
tataaggataaatcccgtgagaagcaaaggaagaagaatttacaagcaaaaaaagaaaaa
gaagaagaaaaaaattcccagaaggtcagcaaaacttcaaaacaaactcctactatcatg
aagaagaaaacagcaaaacagagacgtgctgcacaaacaatagaagacgaagaggaactg
acccgagaataccggctgcttaaaaagctgaaaaagggagccattgatgagagtgaatat
gcaaaattaacaggaatcgaagagttactttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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