KEGG   Chrysemys picta (western painted turtle): 101951592
Entry
101951592         CDS       T04662                                 
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
  KO
K06237  collagen type IV alpha
Organism
cpic  Chrysemys picta (western painted turtle)
Pathway
cpic04510  Focal adhesion
cpic04512  ECM-receptor interaction
cpic04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cpic00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101951592 (COL4A5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101951592 (COL4A5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101951592 (COL4A5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cpic04147]
    101951592 (COL4A5)
   00536 Glycosaminoglycan binding proteins [BR:cpic00536]
    101951592 (COL4A5)
Exosome [BR:cpic04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   101951592 (COL4A5)
Glycosaminoglycan binding proteins [BR:cpic00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   101951592 (COL4A5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 101951592
NCBI-ProteinID: XP_008168268
Position
8:complement(40890119..41031773)
AA seq 1688 aa
MKLRGCRRLAAACLVLLGLWGLSAEAAACHGCASGSKCDCSGVKGEKGERGFPGLGGQPG
LPGFPGPEGPPGPRGIKGDDGLPGPTGPKGIRGPPGLPGFPGTPGLPGLPGQDGPPGLQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGLPGMKGDPGEIILSSLPGQKGDPGFPGLPG
LQGPPGPLGAQGPIGPPGPPGLTGPPGPKGVPGPKGNMGLNFQGPKGEKGDQGLQGPPGP
PGQIGEQKRPNDVEFQKGDQGIPGERGPPGPPGPEGPPGPSGGMKGEKGEQGEPGKRGKP
GKDGDPGQPGRDGLPGDPGLNGVPGRDGEKGMKGERGLPGPPGVITGNGAEVGPKGSKGL
PGFPGPKGERGYPGLTGPPGLSGPPGITGIGPPGPPGLPGERGQKGIQGLPGVSIPGQPG
LDGRPGPPGPPGAPGPPGTTIPPSDRVCQRGPPGFPGLPGEKGFMGEQGQKGDKGETCFN
CIGTGISGPPGDRGPPGPPGSPGSPGFPGPKGEKGLTGLTGLVGPPGFPGPPGAPGFPGS
KGDPGDSLAFPGLKGDKGDTGFPGSPGLPGIDGSPGREGLPGLPGPKGEPGGVAFKGGMG
PPGDPGVPGLPGDRGPMGPPGFGPQGPQGEKGIQGVSGRPGPPGVPGPKGEPGETITEPG
VPGSPGPPGRNGEVGLPGDPGLPGQPGLPGISGPKGDPGIPGIGLPGPPGLKGFPGMAGP
PGAPGAPGRPGFEGPPGQSGFPGQKGDPGFGVPGPPGPPGPPGFKGAQGLKGDPGFPGNP
GLPGRSGSDGTPGPKGDPGPSGPPGLVGPPGFPGIGGQGPPGQPGPPGPVGPPGPPGLQG
VPGEKGDPGPPGFDIPGPPGDRGSPGFPGTPGLTGPPGSPGPPGREGISGFPGAKGEMGV
MGAPGPQGPPGTPGRDGLPGPKGSDGLPGQPGPSGLTGQKGTKGETGLPGPPGQVDPSKL
GSKGEKGEPGISGIPGVSGQKGYQGLQGDPGPPGFNGQPGAPGFPGPKGEPGLPGQSGPA
GPPGQKGAIGETGLPGVPGIKGSQGIAGRPGQPGPPGFPGLKGEKGNPGLSDIGIPGPKG
DTGFPGYPGNPGNKGTPGNPGLAGLPGNPGAKGEAGLPGFPGTPGIVGPRGIDGPPGNPG
LPGSPGPPGGDGRPGPPGLPGEKGQPGRDGIPGPAGQKGEPGQPGFGRPGPPGLPGLSGQ
KGEMGLPGPPGAPGLTGLKGEPGFQGFPGLQGQQGPPGLPGPPMEGPKGSPGPQGVPGRS
GPSGPPGLPGPEGPRGPPGNGGFKGEKGNPGQSGQPGLPGLKGDQGQPGRQGDPGRPGLN
GMKGDPGVPGVPGFPGMKGPIGPPGAIGFKGDQGPSGSPGPPGLPGPAGQTIVVKGDPGP
PGPPGQPGLKGPPGLSGPPGLPGPIGLPGDPGRDGLPGFDGPGGRKGERGLPGQPGFQGT
QGPPGPDGLQGPPGPPGTASVAHGFLITRHSQTTDTPLCPQGTIRIYDGFSLLYVQGNER
AHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPKPMPMSMEPLTGQSI
QPFISRCAVCEAPAMVIAVHSQTIQIPSCPQGWDSLWIGYSFMMHTSAGAEGSGQALASP
GSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEIAEMFSKPQSETLKAGDLRTRISR
CQVCMKRT
NT seq 5067 nt   +upstreamnt  +downstreamnt
atgaagctgcggggctgccgccgcctggctgccgcctgcctggtgctgctggggctctgg
gggctgagcgcagaggctgcggcttgccatggatgtgcatcaggatccaaatgtgactgc
agtggagtaaaaggcgaaaagggcgagagggggttcccagggttaggtggtcagcccggt
ttacctgggtttccgggaccagagggacctcctggcccaagaggcataaagggtgatgat
ggccttccagggcctaccggacccaaaggaatcagaggacctccaggtctgccaggattt
ccaggaacaccaggacttcctgggttaccagggcaagatgggccaccaggacttcaaggt
atccccggatgcaatggaacaaagggggaacgtggattcccaggcagtccaggttttcca
ggtttacaaggtcctcctggacctcctggcctaccaggtatgaagggtgatccgggtgaa
ataattttgtcatcactgccaggccagaaaggtgacccaggatttccaggacttccaggg
ttacaaggccctcctggtcccttgggcgcacaaggtcctattggtcctcctgggccacca
ggtttaacgggacctcctggtccaaaaggggttccagggcctaagggtaatatgggtttg
aacttccaaggacccaagggtgaaaaaggtgaccaaggccttcagggacctccagggcca
ccaggacaaattggggagcagaagagaccaaatgacgtagagtttcagaaaggagatcag
ggtattccaggagaacgaggtccaccaggaccccctgggccagaaggtcctcctggtcct
tcaggtggcatgaaaggtgaaaaaggtgagcaaggagagccaggcaaaagagggaaacct
ggcaaagatggagatcctggccagcccggtagggatggtttacctggcgaccctggttta
aatggtgttccaggaagagatggtgaaaagggtatgaaaggtgaacgtggtctgcctggt
cctcctggagttatcacaggaaatggtgcagaagtgggaccaaaagggagcaaaggactt
ccaggatttccaggacccaaaggcgagcgtggatatcctggcttgacagggcctcctggc
ttgtcagggcctccagggattacaggtataggcccacctggtccacctggtttgcctggg
gagcgaggacagaagggtattcagggtctacccggagtttccatacctggacagcctgga
cttgatggacggccagggccacctggaccgccaggtgcccctggacctcccggaacaact
atccctcctagtgacagagtgtgtcagcgaggacccccgggttttccaggacttccagga
gaaaaaggttttatgggggagcaaggccagaaaggtgataagggagagacgtgctttaat
tgtataggaactggcatttctgggcctcctggggacaggggaccacccggacctccaggt
agcccagggtctcctggtttcccgggaccgaaaggtgaaaaagggctaactggcttaacc
gggctggtcgggccaccaggatttccaggacctccaggtgcccctgggtttcctggttct
aaaggggaccccggggacagcctagctttcccaggactgaaaggtgacaaaggggacact
ggtttcccagggtctcctggtcttcctggcatagatggctctcctggacgagaaggactg
ccaggtcttcctggacccaagggggaacctggtggtgttgctttcaaaggaggaatggga
cctccgggtgatccaggagtgccaggtcttcctggagacagaggacctatgggacctcct
ggttttggcccacaaggtcctcaaggtgaaaaaggcattcaaggtgtatcgggtcgtcca
ggtcccccaggagttccaggtccgaaaggtgaacctggcgaaactattacagaaccagga
gttccaggctcccctggacctccaggaagaaatggtgaagtaggacttccaggtgatcct
ggtctgccaggtcagcctggcttgccaggcatctcaggtcctaagggtgatccaggtata
cctggcattggacttccaggcccaccaggcctaaaaggtttccctggaatggctggcccc
ccaggagcaccaggagcccctggacgaccagggttcgaagggccaccaggacaatctggt
ttcccaggacaaaagggggaccctggatttggtgtcccgggaccacctgggccaccaggg
ccaccgggttttaaaggagctcagggactgaaaggtgatcctggcttcccaggaaaccct
ggtttgccagggcggtcaggttcagatggaactcctgggccaaaaggtgaccctggacca
agcggaccacctgggttagtgggacccccagggttcccaggaattggtggtcaaggtcca
ccgggacaacctggccctccaggacctgtgggcccaccaggtccaccagggttacaagga
gttccaggtgaaaaaggagatcctggacctcctggattcgacatccctggtccacctggt
gacagaggcagtccaggatttccaggaacaccaggtctcactgggcctccaggttcacca
ggaccaccaggacgagagggaatatcaggatttccaggtgccaaaggtgaaatgggtgtg
atgggagctccaggtccacaaggccctcctggaactcctggcagagatggccttcctggt
cctaaaggcagtgatggtttaccaggtcaaccaggaccttctggactgacagggcagaaa
ggcacgaaaggtgaaacaggcctgccaggtccccctggacaagttgatccaagcaagctg
ggatcaaaaggagagaaaggcgagccaggcatttcaggtattcctggagtatcaggccag
aaaggttatcaaggtctccaaggcgacccagggccacctggattcaatgggcaaccaggt
gcaccaggatttccaggccccaagggagagccagggcttcctgggcagtcaggaccagca
ggacctccaggacaaaaaggtgccatcggagagacggggcttccaggtgtcccaggtatt
aaaggctctcaaggcatagcaggacgtcctggccagcctggcccaccaggatttccagga
ttaaagggggagaaaggcaacccaggtctttcagatattggaatccctggccctaagggt
gacactggtttccctggatacccaggtaaccctggcaacaaaggtacacctggaaatcct
ggtttggctggattaccaggtaatccaggtgcaaaaggagaagcaggccttcctggattc
ccagggacaccaggaattgtaggaccaagaggtattgatggacccccaggaaatcctggt
ctcccgggatcacctgggccaccaggtggtgatggccgtcctggccccccaggtcttcca
ggggagaaagggcaaccaggtcgggatggtattcctggaccagctggacagaagggtgaa
ccaggtcaaccaggttttgggcgcccaggacctcctggactcccaggattatcagggcaa
aagggcgagatgggattacctggccctccaggagcccctggacttacaggtctgaagggt
gaaccaggtttccagggattccccggtctacaaggtcaacaaggtccaccaggcctgcct
gggccacctatggaaggtcctaaaggtagtcctggtccacaaggtgtaccggggagatca
ggtccttcaggtcctccaggtctgccagggccagaaggtccacggggtccccctggaaat
ggaggatttaaaggagaaaaaggaaacccaggtcagtcaggccagcctggcctccctggt
ctaaaaggagatcaaggacaacctggacgccagggtgatcctggtcgtcccggcctgaat
ggaatgaaaggtgatcctggggttccaggtgttccaggatttccaggtatgaagggtccc
attggccctccaggagcaattggttttaaaggtgatcaaggcccatcaggttcaccaggt
ccaccaggcttacctggccctgctggacaaaccattgtagtaaaaggtgacccgggtcct
ccaggtccaccaggccagcctggattgaaagggccacctggattgtcaggcccaccagga
ttgccaggtccaataggccttcctggggatcctgggcgagatggacttcctggatttgat
ggtccaggaggacgcaaaggcgagagaggacttccaggccaaccaggctttcaaggtacg
cagggaccgcctggtcctgatggcttgcaaggcccaccaggtcctcctggaacagcttct
gttgctcatgggttccttataactcgacacagccagactacagacacaccactgtgccca
caaggaacaataaggatatacgatggattttctcttctgtacgtgcagggaaatgagaga
gcccatggccaggacttaggtactgctgggagctgtctccgccgtttcagcaccatgccc
ttcatgttctgtaacatcaacaatgtgtgtaattttgcatcaagaaatgattattcctat
tggctgtccactccaaagccaatgccaatgagcatggagccactgactgggcagagcatt
cagccattcattagccgatgtgcagtgtgtgaagctcctgccatggtcattgctgtccat
agtcagaccattcaaattccatcatgtccgcaaggttgggactctctttggattggttat
tctttcatgatgcacactagtgctggtgcagagggctcgggacaggccttggcatcccca
ggttcctgtttggaagaattccgctcagctccttttattgagtgtcatggtcgtggtact
tgtaattactacgctaattcatacagtttctggctggcaactgtagagatagcagaaatg
tttagtaaacctcagtcagagacattgaaagctggagacctgaggacacgtattagtcgt
tgtcaagtttgtatgaagaggacgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (72)   
   KEGG ORTHOLOGY (1)   
   RefGene (68)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (2)   
   Pfam (2)   
All databases (91)   

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