KEGG   Cloacibacillus porcorum: BED41_05825
Entry
BED41_05825       CDS       T04453                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
cpor  Cloacibacillus porcorum
Pathway
cpor03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cpor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BED41_05825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpor03400]
    BED41_05825
Enzymes [BR:cpor01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     BED41_05825
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BED41_05825
DNA repair and recombination proteins [BR:cpor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BED41_05825
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N Auto_anti-p27
Other DBs
NCBI-ProteinID: ANZ44652
UniProt: A0A1B2I3X6
Position
1283271..1284092
AA seq 273 aa
MPELPEVETVRRILEPQVRGLRIVSVTVNHPAVIARPSPEEFCRLTAGRQISGMSRRGKF
LSLCLEGGGRIVLHLRMTGSLLLTPPDYPLEKHTHLIFYLDDGRELRFTDLRRFGRFWLI
ENGEDDIFSGVNRLGPEPLDGDFSAASLRLAFAKRKKAVKSCLLDQEFIAGIGNIYADES
LFLAKIRPDRPAGSLTMAEWERLAAAIKEALLLGIEENRMSAEEYLAGKGRGYRSRYLNV
YGRAGEPCRLCGGRLCRSVVGGRGSVYCPKCQR
NT seq 822 nt   +upstreamnt  +downstreamnt
atgccggagctgccggaggttgagacggtaaggcgaattttagaaccgcaggtcaggggc
ctgcggatagtatctgtgacggtcaaccatcctgcggtcatcgcacgtccttcgccggag
gagttctgccgccttacggcggggcggcagatttcaggcatgtcgcgccggggaaaattt
ctctctctatgtctggaaggcggtggcaggatcgtgctgcatctgcgcatgacgggttcc
cttttgctgacgccgcccgattatcctctggaaaagcatacccacctaatcttttatctg
gacgacggcagggagctgcgctttacggaccttcgccgcttcgggcgcttctggctgatc
gaaaacggtgaagatgatatattcagcggcgttaatcgtctggggccggagccgcttgac
ggtgatttcagcgccgcctccctgcggctggccttcgcgaagcggaaaaaagccgtaaaa
agctgtctgctagaccaggaatttatcgccggtatcggcaacatatacgccgacgaaagt
cttttcttggcaaagatacgtcccgaccgtcccgccggcagcctcacaatggcggagtgg
gagcggctcgccgcggcgataaaagaggcgctgctgcttggcattgaggagaacaggatg
agtgcggaggagtatctcgccggtaagggccgcggttaccgctcccgctatctgaacgtg
tacggacgtgcgggcgagccctgccgcctatgcggcgggcgcctttgccgctccgtcgtc
ggcggacgcggcagcgtctattgcccgaagtgccagaggtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (55)   

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