KEGG   Chenopodium quinoa (quinoa): 110702142
Entry
110702142         CDS       T05764                                 
Name
(RefSeq) methyl-CpG-binding domain protein 4-like protein isoform X1
  KO
K10801  methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    110702142
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cqi03036]
    110702142
   03400 DNA repair and recombination proteins [BR:cqi03400]
    110702142
Chromosome and associated proteins [BR:cqi03036]
 Eukaryotic type
  Heterochromatin formation proteins
   MBPs (metylated DNA binding proteins)
    110702142
DNA repair and recombination proteins [BR:cqi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     110702142
SSDB
Motif
Pfam: HhH-GPD
Other DBs
NCBI-GeneID: 110702142
NCBI-ProteinID: XP_021735503
Position
Unknown
AA seq 639 aa
MASAPRHQENKVPPDTINLNVVNNIPIIVLGLSASSNYKIRGDRIIEGRRELLRKNDENG
IVERNAKVVVLEGEEKRVVSPYFVRLQNNEFVVGSEKNRERELLVSLMNENGKRVVSPYF
VKKEIKKRKRKPDIREDVKGGNEDMNSVRGHDSPFMMATDRENNQVLEENTKGSMKNDSK
EENKRKRKKNILNDKDGNITLPKVRKQRNSNKKTSVIEEELETGDKVKKLRNNADQCCME
KNNAVLSAALITKEAEQENIMVMLESVKVDEEEPLHHLKVDNCLDEPTLCGDQGGYDLMI
GNISEKPKNKKKKKTASLKCDSAAGQENELDPLSLRSIHANQNCSKALASKVISPYFRKV
SKENEFDGERDEADCRNKKKRRVDKTMYVEFEEVLSKYAYQGDSYLNREEEVGGKKEDSS
AGKGKKKRKQQCGSRTLSAAEKRADAYQRKAPNCTWRPPCSPYNLLQEQHAHDPWRVLVI
CMLLNITTGPQVRKVLSHFFDVCPNAEATIGTDVTRIASMIQSLGLHRKRAAMIQQLSRE
YISDDWTHVTQLHGIGKYAADAYAIFCTGKWHQVTPNDHMLNHYWKFLQKRGLKEVAFFS
SKEETVLEICSRDHLVNVSTPTGHIWKAKTGSLYSSSFS
NT seq 1920 nt   +upstreamnt  +downstreamnt
atggcgtctgctccgcggcaccaagaaaataaggtacctcctgatactattaatcttaac
gttgtgaataatattcctattatcgtattaggtttaagtgcatcctctaattataaaatt
agaggtgatagaattatcgagggaaggagagaattattgaggaaaaatgatgaaaatgga
attgttgagcgaaatgccaaggttgttgtgttagagggtgaagaaaagagagtcgtttcc
ccttattttgttagactacagaataatgagtttgttgttgggtctgagaagaatagggaa
agggagttgcttgttagtttaatgaatgagaatgggaaaagagtcgtttctccatatttt
gtgaaaaaggaaataaagaaaaggaagagaaaaccagacattcgggaagatgttaaaggg
ggaaatgaggacatgaattcagtaagaggacatgatagtccttttatgatggcaacagac
agggaaaataatcaagtcctcgaggagaacacaaagggaagtatgaagaatgatagcaag
gaagagaataaaaggaaaaggaagaaaaatattctaaatgataaggatggcaatatcacg
ttaccgaaagtaaggaagcaaagaaatagcaacaagaaaacttctgtgattgaagaggaa
ttggaaacaggagacaaagttaaaaagctgaggaataatgctgaccaatgttgcatggag
aagaataatgctgtgctttctgctgctctcattactaaagaggcagaacaagagaatatt
atggttatgttagagtctgttaaggttgatgaagaggaacccttgcaccatttgaaggtt
gacaattgtctggatgaaccgactttatgtggtgatcaaggcgggtatgacttgatgatt
ggcaacatttccgaaaaaccaaaaaacaagaagaaaaagaaaactgcatctttaaaatgt
gactcagcagctggccaggagaatgaacttgatcccttgtcactgaggtctatacatgct
aaccaaaactgttcaaaagctttggcatccaaggttatctctccatattttagaaaggtg
tcaaaggaaaatgagtttgatggtgaaagagacgaggctgactgtagaaataagaaaaag
agaagggttgacaagactatgtacgttgaatttgaagaggtactttccaaatatgcttac
caaggggacagctacttgaatagggaagaggaagtagggggtaagaaagaagacagtagt
gctggaaaaggtaagaagaaacgtaaacagcaatgtggaagtaggactcttagtgctgct
gagaagcgagctgatgcttaccaaagaaaagcaccaaactgtacctggaggccaccctgc
tctccttacaatcttctgcaagagcagcatgcccatgacccttggagagtgttagtgatt
tgtatgcttttaaatatcactactggaccccaggtcaggaaagttttgtcgcactttttt
gatgtgtgccccaatgctgaagctactattggcactgatgtcactagaatcgcaagtatg
atacaaagtttagggttgcatagaaagagagcagcaatgattcagcaattatctagggag
tatatatctgatgattggacacacgtaactcagctgcatgggattggaaagtatgctgcc
gatgcatatgcaattttttgtactggcaagtggcaccaggtaaccccaaatgaccatatg
ctaaatcattattggaaatttcttcaaaagcgcggcctcaaggaagttgctttctttagt
agcaaggaagagactgtattggagatttgctcacgtgatcacctagtgaatgtgtcaact
cctacaggtcatatttggaaggccaagacaggtagtctatattcatccagtttctcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

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