KEGG   Culex quinquefasciatus (southern house mosquito): CpipJ_CPIJ014611
Entry
CpipJ_CPIJ014611  CDS       T01079                                 
Name
(GenBank) activating signal cointegrator 1 complex subunit 3
  KO
K12854  pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
Organism
cqu  Culex quinquefasciatus (southern house mosquito)
Pathway
cqu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CpipJ_CPIJ014611
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cqu03041]
    CpipJ_CPIJ014611
Enzymes [BR:cqu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     CpipJ_CPIJ014611
Spliceosome [BR:cqu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    CpipJ_CPIJ014611
 Complex C
   U5 SnRNP specific factors
    CpipJ_CPIJ014611
SSDB
Motif
Pfam: Sec63 DEAD ResIII Helicase_C SWI2_SNF2 PhoH AAA_22 AAA_30 DnaB_C nSTAND3 AAA_19 HTH_61 T2SSE
Other DBs
NCBI-ProteinID: EDS40782
VectorBase: CPIJ014611
UniProt: B0X597
AA seq 1036 aa
MLGKTSSATITGITDVSALGRLLPAGDCSELFGRINSGTWPVPGPVLPGKSSRYKTVACN
VYKYCKNIGCFCFEFSPAAGGLPRQLGANLKYDRKSDHFQVTRIGWMSGEFRNITVREEE
TLELQKLMEHVPIPIKESMEEPSAKVNVLLQAYISQLKLEGFALMADMVYVTQSASRLLH
CPEPQVGPAGGQVPNAVQDDRSAHVAEHVPVASVPKDARGDREEDREEELPVGAAANDIG
ELIRVPKLGKTIYKYVHQFPKLELSTHIQPITRYTLRVELTITPDFQWDEKVHGQSQAFW
ILVEDVDSEVILHHEYFLLKYKYCQDDHLVKFFVPVFEPLPPQYFLRIVSDRWIGVETQL
PVSFRHLILPEKNLPPTELLDLQPLPISALREPRFEELYADRFPQFNPIQTQVFNAVYNS
EDNVFVGAPTGSGKTTIAEFAVLRMLQQNPHGRVVYLVSRDALAELIFMDWHQKFGQNLG
CKVVKLTGETGTDLKLIAKGQIIVTTADKWDILSRRWKQRKNVQNIQLFIVDELQLIGGE
EGPVLEVVCSRMRYISSQIEKQIRIIALSDARDVAQWLGCNVNVTFNFYPSVRPIPLELH
VQGFNITHNASRIAAMSKPVYNAATKFSPHKPVIVFVSSRKLGRLTAIDILTYCAADAQL
NRFFQAEEEDIKPFLVRMTDKTLKETLSLGVAYIHEGLTASDHRIVEQLFDSGAVQIVVV
TRDLCWGLNISAYLVIIMDTQFYNGKSHSYDDYPVTDVMQMVGRANRPLEDDDAKCVLMC
QSSKKDFFKKFLNESLPVESHLDHRMHNHFNAEVVTKTIENKQDAVDYLTWTFLYRRLTQ
NPNYYNLQGVTHLHLSDHLSELVKSTLSDLEQSICISVEDEMDTLPLNLGMIAALQEIIF
EDNILAAQLPNKLTVPNETAPKYIDPHIKKNLQLQAHLFRIQTVWNRAGWVCPHQVHCCR
FDSLVGLSSELQLADLHHGSGTGSNTNSGRSSNSAGLQFNRSPPPCPFSKREFIRREVTK
PLEDHILFTNNTRRQH
NT seq 3111 nt   +upstreamnt  +downstreamnt
atgctcggaaagaccagctccgccacaatcaccggaatcacggatgtttctgcacttggt
cggttactccctgccggagattgcagcgagttgttcggaaggatcaacagcgggacttgg
ccagtccccggtccagtgctacccggcaaatcttcccggtacaagactgttgcctgtaat
gtttacaaatattgcaaaaacattggatgtttttgttttgaattttcacccgctgctgga
ggacttccgcgccaacttggtgcaaacctcaagtacgaccgcaaaagtgaccacttccag
gtcaccagaatcggttggatgtccggcgagttccggaacataacggtccgcgaggaagag
acactcgagctgcaaaagctgatggagcacgttccgatcccgatcaaggaaagcatggaa
gaacccagcgccaaggtcaacgtcctcctgcaagcctacatctcccagctgaagctcgag
ggctttgccctgatggccgacatggtgtacgtgacccagtccgcgtcccgtctgctgcat
tgtcctgaaccgcaagtgggcccagctggcggacaagtgcctaacgctgtgcaagatgat
cgatcggcgcatgtagcagagcatgtccccgttgcgtcagttccgaaagatgcccgagga
gatcgtgaagaagatcgagaagaagaacttcccgtaggagcggctgcgaacgatatcgga
gagttgattcgcgtgccgaagctgggcaagaccatctacaagtacgtgcaccagttcccc
aagctggagctgtccacgcacattcaaccgattacgcgttatacgctgcgcgtcgagttg
accatcacgccggacttccagtgggatgagaaggttcacggccagtcgcaggcgttctgg
attttggttgaggacgtcgactccgaggttatcctgcaccacgagtacttcctgctcaag
tacaagtactgccaggacgatcacctggtgaagttcttcgtgccggtgtttgaaccgttg
ccaccgcagtacttcctgcgcatcgtgtccgaccggtggattggcgtggagacgcaactt
ccggtttcgttccgtcacctgattctaccagagaagaacctgccgccgacggagctgctc
gatttgcagccgctgccaatcagtgcgttgcgtgaaccacgcttcgaagagctgtacgcg
gaccggttcccgcagttcaatccgatccagacgcaggtcttcaacgcggtgtacaacagt
gaggacaatgtgtttgtgggtgcgccaaccgggtcgggcaagacgacgatcgcggagttt
gccgtgctgcggatgttgcagcagaatccgcacggtcgggttgtttatctggtctcgagg
gacgcgttggccgagctgatcttcatggattggcaccagaagtttggccagaacttgggc
tgcaaggtggtcaaactgacgggggaaaccggaacggacttgaagctgatcgccaagggg
caaatcatcgtgaccacggcagacaagtgggacattttgtctcggcgttggaagcagagg
aagaacgtccagaatatccagctgtttattgtggacgagctgcagttgattggcggtgag
gaaggtcctgtgttggaggtcgtctgctcccgtatgcggtacatttcgtcccagattgag
aagcagatccggatcatcgcgctgtcggacgcccgggacgtagctcaatggctgggttgc
aacgtgaatgtgaccttcaacttctatccgagcgtgcggccaatcccgctggaactgcac
gtgcagggattcaacattacgcacaacgcgtcgcgcattgcggccatgtccaaaccggtg
tacaacgccgcaaccaagttcagcccgcacaaaccggtgattgtgtttgtgagctcgagg
aagttgggtcgtttgacggcgattgatattttgacttactgtgctgctgacgctcaactg
aaccggttcttccaggccgaggaggaggacattaagccgtttttggttcgcatgacggat
aaaacgttgaaggagacactctcgctgggggttgcgtacatccacgaaggcttgacggcg
tctgatcatcgcatcgtggagcagctgttcgattccggtgcggtgcagattgtcgtcgtc
acgcgagatctgtgctggggcttgaacatttccgcctacctggtgatcatcatggacacg
cagttttataacggtaagagtcactcgtacgacgactacccggtcacggatgtcatgcag
atggtgggaagggccaaccgtccactagaggatgacgacgccaagtgcgtgctgatgtgt
cagagctccaaaaaggacttcttcaagaagttcctcaacgagagtttaccggtggaaagt
catctggatcatcgtatgcacaatcacttcaacgcggaggtcgtcaccaaaaccattgaa
aacaaacaggacgccgttgattaccttacctggacgttcctgtaccggcgactcacccag
aacccgaactactacaacctgcagggcgtcacccacctacacttgtcggaccacctgtcc
gaattggtcaaatcgaccctctccgacctggagcagtccatatgtatcagcgtggaggac
gagatggatacgctgccgctgaatctgggcatgatcgcggcgcttcaggagatcatcttc
gaggacaacattttggccgcgcagttgccaaacaagctgaccgtaccgaacgaaactgct
cccaaatacatcgaccctcacatcaagaaaaacctgcagctgcaggctcacctcttccgc
atccagactgtgtggaatcgagctggctgggtttgcccccatcaggtgcattgctgccgc
ttcgattcgttagtcgggttgtcctccgaactgcagctggcggatctgcatcacggatcc
ggaacaggttctaacaccaacagcggccgaagctcgaactccgcaggactgcagttcaac
agatcaccaccaccatgcccgtttagcaaacgagaattcattcgccgggaagtgacgaag
ccccttgaggatcatattttgttcactaataatacaagaagacaacattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   VECTORBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (24)   

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