KEGG   Carnobacterium sp. 17-4: CAR_c18020
Entry
CAR_c18020        CDS       T01452                                 
Symbol
ydiF
Name
(GenBank) putative ABC transporter
  KO
K06158  ATP-binding cassette, subfamily F, member 3
Organism
crn  Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:crn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:crn03012]
    CAR_c18020 (ydiF)
Translation factors [BR:crn03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    CAR_c18020 (ydiF)
SSDB
Motif
Pfam: ABC_tran ABC_tran_Xtn SMC_N AAA_21 ABC_tran_CTD AAA_22 AAA_29 RsgA_GTPase MMR_HSR1 NACHT NB-ARC AAA_24 AAA_16 AAA_14 AAA AAA_28 Roc YobI-ATPase TniB Dynamin_N AAA_33 RNA_helicase nSTAND3 ATPase_2 nSTAND1 AAA_30 Mg_chelatase MCM DUF4351 AAA_23
Other DBs
NCBI-ProteinID: AEB30459
UniProt: F4BMR3
Position
1881007..1882953
AA seq 648 aa
MILLQAQHVARYFGADVLFENIYLEIQDNSRIALVGRNGTGKSTLLKMIADIEQPDAGKI
VKGKQVTIGYLAQNTGLSSEKSIWDEMLTVFEPVIQLEKDMRTIEQQLGDPALLSNEELY
KSTLDRYDHIQNRFREENGFSYQAEIRSVLHGFRFYEDDYNKHISQLSGGQKTRLALAKL
LLEKKDLLILDEPTNHLDIETLSWLESYLQSYTGALLIVSHDRYFLDKVVNEVYEISRQK
ISHYKGNYSKYLDLKAAQLEQEWKEFEKQQGEIAKLEDFVSRNLVRASTTKRAQSRRKQL
EKMDRIDKPQGDEKSARFSFKSEKESGNVVLTLANGAIGYDDTILSSPIELDVRKYDSIA
LVGPNGIGKSTLLKSLIGQLPLIQGEKHLGTNVLLGYYDQEQSDLNSTKSVLAELWDEHP
TTSEKDIRSILGSFLFSGADVEKTVSSLSGGEKARLALAKLAMNKNNFLMLDEPTNHLDI
DSKEVLENALIDFDGTLLFVSHDRYFINRIATTIIELSENGSTLYLGDYDYYLAKKAEQE
ELRLLAEAKTAETSKVESVPTVKGNREINKAEQKILRQLTRRIETIEAEMDELETIITNC
ETQLIDPEVFGDHLRVQELNTEITIAQEKLDSLVSEWEEKSLQLEELQ
NT seq 1947 nt   +upstreamnt  +downstreamnt
atgattctattacaagcgcaacatgttgctcgttattttggagcagatgtgttgtttgaa
aatatttatttagagattcaagataactcacgcattgcattggtgggtagaaatggtaca
ggaaaatcaacacttctaaaaatgattgcagatatcgagcagcctgatgccggaaagatt
gtcaaaggaaaacaagtgaccattggctatttagctcaaaatactggtttatcttctgaa
aaaagcatttgggatgaaatgttaacagtctttgaaccggtcattcaactagaaaaagat
atgcgtacaattgaacaacaactcggagatcctgcattactttctaatgaagaactctac
aagtcaactttagaccgctatgatcacattcaaaatcgctttcgtgaagaaaatggattt
agttatcaagctgagattcgttctgtcttgcacggatttcgtttttacgaagacgactat
aacaaacacatcagccagctttctggtggacaaaaaactcgattagctttagccaaatta
ttattagaaaagaaagacctactgattcttgatgaaccgacaaaccatttggacatcgaa
acgttaagttggttagaaagttatttacagtcttatactggagcactactgattgtctct
catgaccgttactttctagataaagtagtaaatgaagtttatgaaattagtcgccaaaaa
atctctcattacaaaggaaattattcgaaatatttggacttaaaggctgctcaacttgaa
caagaatggaaagaatttgaaaaacaacaaggtgaaatagcaaaacttgaagattttgtc
agtcgcaatttagttcgtgcttcaacaactaagcgtgcacaaagtcggcgtaagcaacta
gaaaaaatggaccggatagataaacctcaaggagatgaaaagtctgctcgtttctctttt
aaatcagaaaaagaaagtggaaatgttgtcttaaccttggctaatggtgccattggctat
gatgatactattttatccagccctatcgaattagatgtacgaaaatacgattctattgct
ttagtggggcccaacggtattgggaaatcaactttattaaaatcattaattggacaactt
cctttgattcaaggcgaaaagcacttaggaacaaatgtattattgggttattatgaccaa
gaacaatccgatttgaattcaacgaaatctgtattggctgaactttgggatgaacatccg
actacttctgaaaaagatattcgctccattttaggcagttttttattttctggtgctgat
gtagaaaaaactgtctcttcactaagtggaggagaaaaagcacgtctggctttagctaag
ctggcaatgaacaaaaataattttctaatgttagatgaaccaacaaaccatttggatatc
gatagtaaagaggttttagaaaatgcgttaattgattttgatggaaccttattattcgtt
tctcatgaccgctattttatcaaccgaattgcgactacaatcatcgaactatctgaaaat
ggcagcaccctttatttaggtgattatgactattaccttgcaaaaaaggctgagcaagag
gagttgcgtttgctggctgaagcgaagaccgctgagacgtccaaggttgaatctgttcca
acagtcaaaggaaatcgtgaaatcaacaaagcagaacaaaaaatacttcgccagttgaca
cgtcgtattgaaacaattgaagcagaaatggatgaacttgaaacgattattacaaactgc
gaaacacaattaattgatccagaagtatttggagatcatttacgtgtacaagaactgaac
accgaaattactattgctcaagaaaaactagatagtttagtgagtgaatgggaagaaaaa
agcttacaattagaagaattacagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (30)   
   Pfam (30)   
All databases (43)   

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