KEGG   Camelina sativa (false flax): 104726688
Entry
104726688         CDS       T05044                                 
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit D
  KO
K07466  replication factor A1
Organism
csat  Camelina sativa (false flax)
Pathway
csat03030  DNA replication
csat03420  Nucleotide excision repair
csat03430  Mismatch repair
csat03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104726688
   03420 Nucleotide excision repair
    104726688
   03430 Mismatch repair
    104726688
   03440 Homologous recombination
    104726688
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:csat03000]
    104726688
   03032 DNA replication proteins [BR:csat03032]
    104726688
   03400 DNA repair and recombination proteins [BR:csat03400]
    104726688
Transcription factors [BR:csat03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    104726688
DNA replication proteins [BR:csat03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    104726688
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     104726688
   MMR (mismatch excision repair)
     104726688
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     104726688
SSDB
Motif
Pfam: Rep_fac-A_C Rep-A_N REPA_OB_2 tRNA_anti-codon DUF223 CDC24_OB3 zf-RRPl_C4 DUF5651
Other DBs
NCBI-GeneID: 104726688
NCBI-ProteinID: XP_010443916
Position
11:complement(46110992..46114196)
AA seq 637 aa
MQTASVTPDAISSVLSNPSFDSSSDRPEIVVQVVDLKPIGNRYTFGANDGKTKVKAMFTA
SLTPEIISGKIQNLCLIRLIDFTVNDISSKSTKYFLVTKCEAVGSVLDSEINLESKSQEE
EEATTEPKRQKLEHSPVSDVKMDVSTGITLKPKQEFVSKSASQIMTEQRGNAAPAARMSM
TRRVHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMFN
DAARKFYDRFQLGKVYYISRGTLKLANKQFKTIQNDYEMTLNDNSEVEEASSEEMFIPET
KFNFIPIEELGMYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESKKTVV
VSLWNDLATGIGQELLDMADKSPVIAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKKL
KSWFDSEGKEVSMSSIGSGMSPLSKNGSRSMYTDRVLLSHITSNPSLGEEKPVFLSTRAY
ISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQKKYEECSLRYIMAVKVTDSSGETW
ISSFNDEAEKILGCSADELNKLRSEEGEVNEYQTKLKEATWSCHAFRVSVTQNEYNGEKR
QRVTVKGVAPVDFAAETRLLLQDISNKTNNKASQLLF
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgcagacagcttcagtgaccccagatgctatttcatccgttttgtcgaacccttccttt
gattcttcctctgatcgccctgagatcgttgttcaagttgtggatcttaaacctatcggc
aatagatatacatttggtgcaaatgacggaaagacgaaagtgaaagcaatgtttacagct
tcactgacacctgagattatatctggcaagattcaaaatctgtgtctcattcgtctcatc
gatttcactgttaacgacatttcaagcaaatcaactaaatatttccttgtgacaaaatgt
gaggctgttggttctgtgcttgattctgagattaacttggagagtaagagccaagaagag
gaggaagctactactgagcccaagaggcagaaactagagcattctcctgtgagtgatgtt
aaaatggatgtttctactggtatcactttgaaaccgaagcaggagtttgtatccaaatca
gcttctcagatcatgactgaacaaaggggaaatgctgcaccagctgcaagaatgtctatg
actagaagggttcatccacttgtgtccttgaatccctatcaaggaaactggaccatcaaa
gtcagagttacaaacaagggagtcatgagaaactacaaaaacgctagaggagaaggatgt
gtcttcaacgttgaacttacagatgaagaaggaacacaaattcaagcaacaatgtttaat
gatgctgcaaggaagttctatgacagattccaattaggaaaggtctattatatatcaagg
ggaacacttaaacttgctaacaagcagttcaagactattcagaatgattatgagatgaca
ctcaatgataattcagaggttgaggaagctagtagcgaagaaatgttcatccctgagaca
aaattcaactttattcccattgaagagttggggatgtatgtcaatcagaaggagcttatt
gatcttatcggagttgttcaaagtgtatctcctaccatgagtattagaaggagaactgac
aatgagatgattcctaagagggatataaccttggctgatgagtcaaagaaaactgtcgtg
gtgtccctgtggaacgaccttgcaactggcataggtcaagaactactagacatggctgat
aagtcacctgtgattgcaatcaagtctctcaaagttggagattttcaaggtgtttcgttg
tccaccatcagcagaagcaatgtggttataaacccagaatcacccgaagctaaaaagttg
aaatcttggttcgattctgaaggcaaagaagtatccatgtcttccattggatcagggatg
agcccattatccaagaatggatctcggtctatgtatactgaccgagtccttctttctcac
atcacaagcaacccatctttaggcgaagaaaagcctgtatttctcagcacaagggcgtac
ataagcttcatcaaaccagaccagacaatgtggtaccaagcttgtaagacttgtaacaag
aaagtgacggaagcacttgactctggttactggtgtgaaggatgccagaaaaaatatgaa
gaatgcagcttaaggtacataatggctgtgaaagtcaccgactcatctggagaaacttgg
atttcctcattcaacgatgaagcagagaagattcttggatgttcagctgatgagctcaac
aaactaagatcagaggaaggtgaagtgaatgaatatcagacaaaactcaaagaagcaacc
tggtcatgtcatgccttccgagttagtgtcacgcagaatgagtataacggagagaagagg
cagagggtaactgtgaaaggagtagctcctgttgattttgctgctgaaacaagattgttg
ctccaagacatctccaacaaaaccaacaacaaagcatctcagttgttgttttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system