KEGG   Camelina sativa (false flax): 104762210
Entry
104762210         CDS       T05044                                 
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit D-like
  KO
K07466  replication factor A1
Organism
csat  Camelina sativa (false flax)
Pathway
csat03030  DNA replication
csat03420  Nucleotide excision repair
csat03430  Mismatch repair
csat03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104762210
   03420 Nucleotide excision repair
    104762210
   03430 Mismatch repair
    104762210
   03440 Homologous recombination
    104762210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:csat03000]
    104762210
   03032 DNA replication proteins [BR:csat03032]
    104762210
   03400 DNA repair and recombination proteins [BR:csat03400]
    104762210
Transcription factors [BR:csat03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    104762210
DNA replication proteins [BR:csat03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    104762210
DNA repair and recombination proteins [BR:csat03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     104762210
   MMR (mismatch excision repair)
     104762210
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     104762210
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N tRNA_anti-codon DUF223 CDC24_OB3 zf-RRPl_C4 DUF5651
Other DBs
NCBI-GeneID: 104762210
NCBI-ProteinID: XP_010483760
Position
18:complement(17413271..17416534)
AA seq 639 aa
MQTASVTPDAISSVLSNPSFDSSSDRPEIVVQVVDLKPIGNRYTFSANDGKTKVKAIFTA
SLTPEIISGKIQNLCLIRLIDFTVNDISSKSTKYFLVTKCEAVGSVLDSEINLESNSQEE
EEATTEPKRQKLDHSPAPVTPVSDVKMDVSTGITLKPKQDFVSKSASQIMSEQRGNAAPA
ARMSMTRRVHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQ
ATMFNDAARKFYDRFQLGKVYYISRGSLKLANKQFKTIQNDYEMTLNDNSEVEEASSEEM
FIPETKFNFIPIEELGMYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADES
KKTVVVSLWNDLATGIGQELLDMADKSPVIAIKSLKVGDFQGVSLSTISRSNVVINPESP
EAKKLKSWFDSEGKEVSMSSIGSGMSPLAKNGSRSMYTDRVLLSQITSNPSLGEEKPVFL
STRAYISFIKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQKKYEECSLRYIMAVKVTDS
SGETWISSFNDEAEKILGCSADELNKLRSEEGEVNEYQTKLKEATWSCHAFRVSVTQNEY
NGEKRQRVTVKGVAPVDFAAETRLLLQDISNKNNNQASQ
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgcagacagcttcagtgacccctgatgctatttcctccgttttgtcgaacccttccttt
gattcttcctctgatcgtcctgagatcgttgttcaagttgtggatcttaaacctatcggc
aatagatatacatttagtgcaaatgacggaaagacgaaagtcaaagcaatctttacagct
tcactgacacctgagattatatctggcaagattcaaaatctgtgtctcattcgtctcatt
gatttcactgttaacgacatttcaagcaaatcaactaaatatttccttgtcacaaaatgt
gaggctgttggttctgtgcttgattctgagattaacttggagagtaacagccaagaggag
gaggaagctactactgagcccaagaggcagaaactagaccattctcctgctcctgtcact
cctgtgagtgatgttaaaatggatgtttctactggtatcactttgaaacctaagcaggac
tttgtatccaaatcagcttctcagatcatgagtgaacaaaggggaaatgctgcaccagct
gcaagaatgtctatgactagaagggttcatccacttgtgtccttgaatccctatcaagga
aactggaccatcaaagtcagagttacaaacaagggagtcatgagaaactacaaaaacgct
agaggagaaggatgtgtcttcaacgtggaacttacagatgaagaaggaacacaaattcaa
gcaacaatgtttaatgatgctgcaaggaagttctatgacagattccagttaggaaaggtc
tattatatatcaaggggatcacttaaacttgctaacaagcagttcaagactattcagaat
gattatgagatgacactcaatgataattcagaggttgaggaagctagtagcgaagaaatg
ttcatccctgagacaaaattcaactttattcccattgaagagttggggatgtatgtcaat
cagaaggagcttattgatcttatcggagttgttcaaagtgtatctcctaccatgagtatt
agaaggagaactgacaatgagatgatccctaagagggatataaccttggctgatgagtca
aagaaaactgtcgtggtgtccctgtggaacgaccttgcaactggcataggtcaagaacta
ctagacatggctgataagtcacctgtgattgcaatcaagtctctcaaagttggagatttt
caaggtgtttcgttgtccaccatcagcagaagcaatgtggttataaacccagaatcgcca
gaagctaaaaagttgaaatcttggttcgattctgaaggcaaagaagtgtccatgtcttcc
attggatcagggatgagcccattagccaagaatggatctcggtctatgtatactgaccga
gtccttctttctcaaatcacaagcaacccctctttaggcgaagaaaagcctgtatttctc
agcactagggcttacataagcttcatcaaaccagaccagacaatgtggtaccaagcttgt
aagacttgtaacaagaaagtgacggaagcacttgactctggttactggtgtgaaggatgc
cagaaaaaatatgaagaatgcagcttaaggtacataatggctgtgaaagtcaccgactca
tctggagaaacttggatttcctcattcaacgatgaagcagagaagattcttggatgttca
gctgatgagctcaacaaactaagatcagaggaaggtgaagtgaatgaatatcaaacaaaa
ctgaaagaagcaacctggtcatgtcatgccttccgagttagtgtcacgcagaatgagtat
aacggagagaagaggcagagggtaactgtgaaaggagtagctcctgttgattttgctgct
gaaacaagattattgctccaagacatctccaacaaaaacaacaaccaagcttctcagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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