KEGG   Camelina sativa (false flax): 104766998
Entry
104766998         CDS       T05044                                 
Name
(RefSeq) transportin-1-like
  KO
K18752  transportin-1
Organism
csat  Camelina sativa (false flax)
Pathway
csat03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104766998
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104766998
   03009 Ribosome biogenesis [BR:csat03009]
    104766998
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104766998
Ribosome biogenesis [BR:csat03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    104766998
  Pre-60S particles
    104766998
SSDB
Motif
Pfam: HEAT_EZ HEAT IBN_N HEAT_2 CEP104-like_TOG Vac14_Fab1_bd CLASP_N MMS19_C DUF3437 Usg
Other DBs
NCBI-GeneID: 104766998
NCBI-ProteinID: XP_010489304
Position
19:23244882..23255552
AA seq 893 aa
MAATAVVWQPRDDGLAEICALLEQQISPSSVVDKSQIWQQLQHFSQFPDFNNYLVFILVR
AEGKSIEVRQAAGLLLKNNLRGAYPSMVQENQKYIKSALLPCLGAADRNIRTTVGTIISV
IVNIEGVSGWSELLPALVTCLDSNDLNHMDGAMDTLSKICEDIPHVLDSEVPGLAERPIN
IFLPRLFQFFQSPHASLRKLALGSVNQYIIIMPAALFHSMDKYLQGLFVLANDPVAEVRK
LVCAAFVHLTEVLPSSIEPHLRNLMEYMLQVNKDPDEEVSLEACEFWSAYCDAQLPPENL
KEFLPRLIPVLLENMAYADDDESLLDAEEDESQPDRDQDLKPRFHTSRLHGSEDFDDDDD
DDDSFNVWNLRKCSAAAIDVLSNVFGDDILPALMPLIQTKLSASGDEAWKDREAAVLALG
AIAEGCMTGLYPHLSEIVAFLLPLLDDKFPLIRSISCWTLSRFGKYIIQESGNSKGYEQF
EKVLLGLLRRLLDTNKRVQEAACSAFATLEEDASEELLPHLGVILQHLMCAFGKYQRRNL
RIVYDAIGTLADSVRGELNKPAYLEILMPPLVAKWQQLSNSDKDLFPLLECFTSISQALG
VGFAPFAQPVFHRCMDIIQLQQLAKVDPASAGAQYDREFIVCSLDLLSGLTEGLGSGIES
LVSQSNLRDLLLKCCIDEAADVRQSAFALMGDLARVFPVYLQPRLLEFLEIASQQLSANL
IRENLSVANNACWAIGELAVKVRQEVSPIVANVVSSLGLILQHGENVNKALVENSAITLG
RLAWIRPDLVAPHMEHFMKPWCLALSMVRDDIEKEDAFRGLCSVVKANPSGGVSSLVFIC
QAIASWHEIRSEDVQNEVTQVLNGYKQMLGNSWAECLSALKTPVKERLARYQV
NT seq 2682 nt   +upstreamnt  +downstreamnt
atggcggcgacggcggtggtctggcaaccccgagacgacggtctcgccgagatctgcgct
cttctcgaacaacagatttctccttcctccgtcgtcgacaagtctcagatttggcagcag
cttcaacacttctctcagttccctgatttcaacaactatctcgtcttcatcctcgttcgc
gctgagggtaagtccatagaggttcgccaagctgctggcttgcttctgaaaaataatttg
aggggtgcttatccatccatggttcaagaaaaccaaaaatacatcaagtcagcgttgttg
ccttgtctgggagcagcggacaggaatatacggactacagttggaactatcatcagtgtt
attgttaatatcgaaggagtttctggatggtctgagcttttgccagctcttgttacttgc
ttagacagtaatgatctaaatcacatggatggtgcgatggatacattgtcaaagatttgt
gaggatatcccgcatgtcttggattcagaagtgcctggcttagcagagcgccctatcaac
attttcttgcctaggctatttcagttttttcagtcaccccatgcttcactgaggaagctt
gccctgggttctgtgaaccaatatatcataataatgcctgctgctttgttccattcaatg
gataagtaccttcagggtttgtttgtcctcgccaatgatcctgtagcagaagtcagaaaa
ttggtctgcgcagcatttgtgcacctcacggaagtcctcccctcatctatagagccgcat
ctcaggaatctcatggagtacatgttacaagttaacaaagaccctgatgaagaagtgtct
ctcgaagcatgtgaattttggtctgcatactgtgacgctcagctgccgccagagaacttg
aaagagtttctgccacgcctaattccagtgttgcttgaaaacatggcttatgcagatgac
gacgagtcccttttggatgcagaggaagatgagtctcaaccagacagagatcaggatttg
aaacctcgttttcatacatcaagacttcatggatcagaggattttgatgatgatgatgat
gatgatgactcgtttaacgtgtggaatttaagaaagtgtagtgcagcagctattgacgtt
ctctccaatgtatttggagatgacatccttccagcactcatgcccctaattcagacaaaa
ttgtcagcttctggtgatgaggcctggaaagatagggaagctgctgttttggctctcggg
gctattgctgaaggctgcatgactggtctttaccctcacttgtctgagattgtagcattt
cttcttcctcttttagatgataaattcccgctaatacgaagcatatcttgctggacgctt
tctcgatttggcaagtatattatccaggaaagtggcaattcgaagggttatgaacagttt
gagaaagtgcttttgggtcttctccgcagactcttggatacaaacaagcgggtccaggag
gctgcctgttcggcttttgcaactcttgaagaggatgcttctgaagagttactgccacac
ctgggggtgatactgcagcatctgatgtgcgcttttggaaagtatcagagacggaactta
agaattgtttatgatgctattggaacactggcagattcagttagaggagagctgaacaag
cctgcttatcttgagattctgatgcccccactggttgcaaagtggcaacaactttcaaac
tcagataaagatctatttccattgctagaatgcttcacatccatttctcaggctttaggt
gttggattcgctccatttgctcagcctgttttccatagatgcatggatatcatccaactg
cagcagctggctaaggttgatcctgcttctgctggggctcagtacgacagggaattcatt
gtttgttctcttgatctgctttctggacttactgaaggacttggcagtgggatagagtct
ctggtttcacaaagtaatctaagggatctgcttctcaagtgttgcattgatgaagctgct
gatgtcagacaaagtgcttttgccttaatgggtgatcttgcaagagtattcccggtctat
ctacaaccccgcctgcttgagttccttgaaattgcaagccagcaactgagtgcaaacctc
attcgagaaaacctttctgtcgcaaataatgcttgttgggccattggagaattagcagtc
aaggttcgtcaagaagtctctccaattgtggccaacgttgtctcttccctaggcctgatt
cttcaacatggagagaatgtcaataaagcactagttgagaacagtgcaattacccttggg
agactagcatggattcgtccagaccttgtagcaccacacatggagcactttatgaagcca
tggtgcctggcattgtcgatggtccgtgatgacattgagaaagaagatgcatttagagga
ttatgctcagtggttaaagcgaatccatcaggaggtgtcagctcactagttttcatatgc
caagccatcgcaagttggcatgaaataagaagtgaggacgtacagaacgaagtcacccaa
gtactgaacggctataaacagatgctgggaaactcatgggcggaatgtttatctgctttg
aaaactcctgtaaaggaaaggcttgcgagatatcaagtgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (10)   
   Pfam (10)   
All databases (25)   

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