KEGG   Camelina sativa (false flax): 104788412
Entry
104788412         CDS       T05044                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 12
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104788412
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104788412
   03036 Chromosome and associated proteins [BR:csat03036]
    104788412
Enzymes [BR:csat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     104788412
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104788412
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     104788412
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    104788412
SSDB
Motif
Pfam: DEAD Helicase_C
Other DBs
NCBI-GeneID: 104788412
NCBI-ProteinID: XP_010512458
Position
5:33616451..33619567
AA seq 502 aa
MNNNNRGRYPPGVGTGRGAPPNPDYHHQSYRQQQQPQDHQQQQYVQRGYPQNPQQMQLQH
QQQQQHQQQQWSRRPQIPGNANNANEVQKTSQSEATSEPNGQDWKATLRLPPPDTRYQTA
DVTATKGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTG
AFCIPVLEKIDPNNNIIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDI
MRLHQPVHLLVGTPGRILDLTKKGVCVLKDCGMLVMDEADKLLSAEFQPSLEELIQFLPQ
NRQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQLTLVGVTQYYAFVEERQKVHCLNTLF
SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLV
CTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQT
EQELGTEIKPIPSNIDQAIYCQ
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgaataataataacagaggaaggtatccaccgggtgttggaaccggacgtggtgcgccg
ccgaatccagattatcatcatcagtcgtatcgtcagcaacagcagcctcaagatcatcag
cagcagcagtatgttcagcgcggctatccgcagaaccctcagcagatgcaactccagcat
caacaacaacagcagcaccagcagcaacagtggtcaagacgccctcagattcctggaaac
gccaataacgctaatgaggttcagaagacgtctcagtccgaagctaccagcgaacctaat
ggccaagattggaaggcaacgttaaggctcccacctcctgacacacgttatcagactgcg
gatgtgacagctactaaaggaaatgaattcgaagattactttctgaaaagagatctgtta
aagggaatatatgagaagggttttgagaagccatctccaattcaagaagagagcattcca
attgctttaactggtagtgatatacttgctagagccaaaaacggcacaggaaagactggt
gccttctgcattccagtcctcgagaaaattgatccaaataacaatattattcaagccatg
attctagtgccaacgcgagaactggcccttcagacatcacaggtctgcaaagagctttcc
aagtatttgaatatccaggtaatggtcaccactggcggtaccagtctgagagatgatatc
atgcgactacatcaacctgtacatctgttggttggaactcctggaagaatattggatctt
acaaaaaagggtgtgtgtgttttgaaagactgtggaatgcttgtaatggatgaggccgac
aagcttttgtctgcagaattccaaccttcactagaggaattgatacagtttctgccacaa
aatcgtcaatttttgatgttttccgccacatttcctgtcactgtcaaggcttttaaggat
cgccatctccggaagccctatgttatcaatctcatggatcaactcacgcttgtgggtgtc
acacaatattatgcctttgttgaagaaagacagaaggttcactgcctcaacacacttttc
tctaagctgcaaataaatcaatcgataattttttgcaattctgtcaatcgagtggagctg
ttggctaagaaaatcacagaacttggttattcatgcttctacattcatgcaaagatggtt
caagaccatagaaacagagtgttccatgagttccgcaatggtgcttgcaggaatctcgtc
tgcaccgatctgtttactcgtggaatagacattcaagctgtgaatgtagtgatcaacttt
gattttcctaggacttccgagtcgtatctacacagggtgggacgatcaggacggtttgga
caccttggattggctgtgaatttggtaacatacgaggatcgcttcaaaatgtatcagact
gagcaggaacttgggactgaaatcaaaccaattccttctaatatcgatcaagcaatctac
tgtcagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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