KEGG   Caldicellulosiruptor saccharolyticus: Csac_2136
Entry
Csac_2136         CDS       T00506                                 
Name
(GenBank) metal dependent phosphohydrolase
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
csc  Caldicellulosiruptor saccharolyticus
Pathway
csc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Csac_2136
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csc03019]
    Csac_2136
Messenger RNA biogenesis [BR:csc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Csac_2136
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH OmpH Cas3_HD
Other DBs
NCBI-ProteinID: ABP67719
UniProt: A4XLD4
Position
complement(2274234..2275799)
AA seq 521 aa
MQKISDTLKLIITAGVSIALAIVAFFLGYLYRKKIAEKTIKSAEQEAQRIVEEAKKQAEA
YKKEATLLAKEEIHRARSEFDREVRERRAELQRFERRLIQKEEMLDKKMAAVEEKEEQLN
QKIKDVQKLQEEIELLKQKQQEELQRISGLTQEEARQIILKSVEQDVKHDVALMIKELEQ
QAKEEADKKAREIIALAIQRYSSDYVAENTVSVVTLPNDEMKGRIIGREGRNIKTFETVT
GIDLIIDDTPEAVILSGFDPIRREIAKLTLEKLILDGRIHPARIEEMYEKAKREVENKIR
EEGERVVFELGIHNLHPELIKLIGKLRYRTSYGQNVLAHSIEVANIAGIMAAELGLDQSI
AKRAGLLHDIGKAVDHEVEGSHALIGYDLAKRYKETNPDVLEAIGGHHGEMETRSIYNVL
IQAADSVSAARPGARRESLESYIKRLQKLEEIANSFDGVEKAYAIQAGREIRIMVKPDHV
SDDDIVIMAREIVKRIESELDYPGQIKVNVIREVRAVEYAK
NT seq 1566 nt   +upstreamnt  +downstreamnt
gtgcaaaagattagtgatacattaaagttaataattactgcaggagtcagtatagctctt
gcaatagttgcctttttcttgggctatttatatagaaaaaagattgcagaaaagactata
aaaagtgccgaacaagaagcccaaagaattgtcgaggaagcaaaaaaacaagccgaggca
tataagaaagaagcaacactcttagcaaaagaagagattcacagagcaagaagcgagttt
gacagagaggtcagagaaaggcgtgcagagcttcagagatttgaaagaaggctgatccaa
aaagaagagatgcttgataaaaaaatggctgctgttgaggaaaaagaagagcagttgaat
caaaaaataaaggatgtccaaaaactacaagaggagatagaactattaaaacaaaagcag
caggaagagcttcaaagaatttctggacttacccaagaagaagcacgccagattatccta
aagagtgttgagcaggatgtaaaacacgatgttgcacttatgattaaggagttagaacaa
caagcaaaagaagaggctgataaaaaagccagagaaatcattgcacttgctatccaacga
tactcttcagactatgtggcagaaaacactgtatctgttgtaacgttaccaaatgacgaa
atgaaaggtagaataataggaagagaaggaaggaatatcaagacatttgaaactgtcact
ggaattgatctaattatcgatgacactccagaggctgtgattctttcaggatttgatcct
ataaggcgtgagattgcaaaactcactttagaaaagctgattttggatggtcgaatccat
cctgcgcgaattgaagaaatgtatgaaaaagctaaacgtgaagttgaaaacaagattcgt
gaagaaggcgaaagagttgtatttgaacttggtattcacaaccttcacccagagcttata
aagttgattggtaagcttagatacagaacaagttatggtcaaaacgtacttgctcactct
atcgaggttgcaaacattgcaggtatcatggcagcagaacttggacttgaccagagcatt
gcaaaacgagcaggacttttgcatgacattggtaaagctgttgaccatgaggttgaaggt
tctcatgctttaattggttatgatcttgcaaaaaggtataaagaaacaaaccctgatgtt
ctggaagcgattggtggacatcacggtgagatggaaacaaggtcaatttacaatgtgtta
attcaagctgctgattcagtttcagcagcacgaccaggggcaagaagagaatctcttgag
tcgtatataaagagacttcagaagcttgaagaaattgcaaactcatttgatggtgttgag
aaagcatatgctattcaagcaggtagagagataagaattatggtaaaaccagatcatgtc
agtgacgatgatattgtcataatggcaagagagatagtgaaaagaattgaaagtgaactt
gattaccctggacagataaaggtaaatgtcattcgtgaagttagagctgttgaatatgca
aagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (39)   

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