KEGG   Corynebacterium sphenisci: CSPHI_08825
Entry
CSPHI_08825       CDS       T05122                                 
Name
(GenBank) ABC transporter
  KO
K03701  excinuclease ABC subunit A
Organism
csph  Corynebacterium sphenisci
Pathway
csph03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csph00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CSPHI_08825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csph03400]
    CSPHI_08825
DNA repair and recombination proteins [BR:csph03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CSPHI_08825
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CSPHI_08825
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_29 AAA_21 nSTAND1 DnaJ_CXXCXGXG AAA_25 AAA_16 Anti-TRAP DUF5351 AAA_15
Other DBs
NCBI-ProteinID: APT91106
UniProt: A0A1L7CYY5
Position
complement(1904177..1906633)
AA seq 818 aa
MVRVRGAAEHNLRDLDLDIPRNRLVAFTGVSGSGKSSLAFGTIYAEAQRRYFESVAPYAR
RLLDQVGAPKVTDITGLPPAVALRQRRGAGGARSSVGTITTLSNLLRMLYSRTGSYPEGA
AHLDAESFSPNTAAGACPGCGGLGETHDADPALLVPDDSLSIREGAIAAWPGAWQGANLR
SVVAGLGIDIDRPWRELDPATRDWLLFTEEQPRVFIQPQDDRIDHSYHGTFRSARTHIRH
VLATSASERMRRRALSFTRAMACPDCAGTGLRAEARAVTFAGAGIDRATALPMAELAELL
RPAAENPDPAPAVPGAASGERTEVARRIAADLRSRIAVLVDLGLGYLSLDRRATTLSAGE
AQRLRLATQLRSGLFGVVYVLDEPSAGLHPADKEPLQEVLTGLRDAGNSLFVVEHDLDLV
RRADWVVDIGPGAGEHGGQVVHAGPPAELAAAAGSATGDYLAGRRRIRRRPPRPGTGAIR
LTGVRRHNLRDLDAAFPLGALTAVTGVSGSGKSTLVTGVLADAVRGWLDGSAGGSAASLS
IDAAEPSAGVDRLVLVDQRPIGRTPRSTPATYVGLFDAVRRLFAGTPEARRRGWAPGRFS
FNVAGGRCPTCEGDGFVEVELLFLPGSHGPCPDCRGARYTPETLEVTWGGRSIAEVLDMT
VDEALAFFAGQPAVARGLAALAQVGLGYLRLGQPATELSGGEAQRVKIAAELQRARRGRS
LYLLDEPTAGLHPADAELLFEQLRALVDDGATVVLVEHDLDLIAAADHVIDLGPGGGDSG
GRVVAAGAPAEIAAAPGSVTGRYLARRLAAGAAGEGAG
NT seq 2457 nt   +upstreamnt  +downstreamnt
ctggtgcgcgtgcgcggcgccgccgagcacaacctgcgcgacctggacctggacatcccc
cgcaatcggctggtcgccttcaccggggtctccggctccgggaagtcctccctggccttc
ggcaccatctacgccgaggcgcagcgccgctacttcgagtcggtggccccctacgcccgc
cggctgctcgaccaggtcggcgccccgaaggtcaccgacatcaccgggctgccgccggcg
gtggcgctgcggcagcgccgcggcgccggcggggcgcggtcctcggtgggcaccatcacc
accctgtccaacctgctgcggatgctgtactcgcgcaccggcagctatccggagggcgcg
gcccacctggacgcggagtcgttctccccgaacaccgccgccggggcctgcccgggctgc
ggcgggctgggggagacccatgacgcggacccggcgctgctggtcccggatgattcgctg
agcatccgcgagggcgccatcgccgcctggcccggggcctggcagggggcgaacctgcgc
tccgtggtcgccgggctgggcatcgacatcgaccgcccctggcgggagctcgatcccgcc
acccgggattggctgctgttcaccgaagagcagccgcgggtgttcatccagccccaggac
gaccggatcgaccacagctaccatggcaccttccgcagcgcgcgcacccatatccggcat
gtgctggccacctccgccagcgagcggatgcgccgccgggcgctgtccttcacccgggcg
atggcctgcccggactgcgccggcaccggtctgcgcgccgaggcccgcgcggtgaccttc
gccggggcgggcatcgaccgggccaccgcgctgcccatggcggagctggccgagctgctg
cgcccggcggcggagaaccccgacccggcgccggcggtgcccggggcggcctccggggag
cgcaccgaggtggcccgccggatcgccgcggacctgcgctcccggatcgcggtgctggtg
gacctgggcctgggctacctcagcctggaccggcgggcgaccaccctctccgcgggggag
gcgcagcggctgcgcctggccacccagctgcgcagcggcctgttcggggtggtctacgtc
ctcgacgagccctccgcggggctgcacccggcggacaaggagccgctgcaggaggtgctc
accgggctgcgcgacgccggcaactccctgttcgtggtggagcatgacctggacctggtg
cgccgggcggactgggtggtggacatcggccccggcgccggggagcacggcgggcaggtg
gtgcacgccgggccgccggcggagctggccgcggcggccggctccgccaccggcgactac
ctcgccgggcggcgccggatccggcgccgcccgccccggcccggcaccggggcgatccgg
ctcaccggggtgcgccggcacaatctgcgcgatctggacgccgccttcccgctgggcgcg
ctcaccgcggtcaccggggtcagcggctccgggaaatccaccctggtcaccggggtgctc
gcggatgcggtacgggggtggctggacgggtccgccggcgggtccgccgcctcgctcagc
atcgacgcggccgagccgtccgccggggtggaccggctggtgctggtcgaccagcggccc
atcgggcgcacccccaggtccaccccggcgacctacgtgggcctcttcgacgcggtgcgc
cggctcttcgcggggaccccggaggcccgccgccggggctgggcgccgggccggttctcc
ttcaacgtcgccggcgggcgctgccccacctgcgagggcgacgggttcgtggaggtggag
ctgctcttcctgcccggcagccacgggccctgcccggactgccgcggcgcccggtacacc
ccggagaccctggaggtcacctggggcgggcgcagcatcgccgaggtgctggacatgacc
gtggacgaggccctggccttcttcgccgggcagcccgcggtggcccggggcctggccgcc
ctggcgcaggtgggcctgggctacctgcggttgggccagccggccacggagctcagcggc
ggggaggcgcagcgggtgaagatcgccgcggagctgcagcgggcccgccgcgggcgcagc
ctgtacctgctcgacgagcccaccgccgggctgcacccggccgatgccgagctgctcttc
gagcagctgcgggccctcgtcgacgacggcgccaccgtggtgctcgtcgagcatgacctg
gacctcatcgccgccgccgaccacgtcatcgacctgggccccggcggcggggactccggc
ggccgggtggtcgccgcgggcgccccggcggagatcgccgcggccccgggcagcgtcacc
ggccggtacctggcccgtcggctcgccgccggggccgcgggggagggggccggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (19)   

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