KEGG   Thermoclostridium stercorarium subsp. stercorarium DSM 8532: Cst_c02550
Entry
Cst_c02550        CDS       T02440                                 
Name
(GenBank) N-glycosylase/DNA lyase
  KO
K03660  N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
Organism
css  Thermoclostridium stercorarium subsp. stercorarium DSM 8532
Pathway
css03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:css00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Cst_c02550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:css03400]
    Cst_c02550
Enzymes [BR:css01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Cst_c02550
DNA repair and recombination proteins [BR:css03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Cst_c02550
SSDB
Motif
Pfam: OGG_N HhH-GPD DUF4535 HHH
Other DBs
NCBI-ProteinID: AGC67279
UniProt: L7VKT9
Position
complement(280443..281315)
AA seq 290 aa
MYRIISTDNNNLTVRIDDFNPSHTFLCGQCFRWNQEDEGTWSGVALGRFVRLKWDGELCT
FFDMTEKEFIEKWVDYFDLNTDYGEIKKILAGKDEHLREAVSFGYGIRLLRQDLWEVMLS
FIISQNNQIPRIKKIIETLSEHYGQKISGADNRYTFPDAFSLARANIEDLKICRPGYRLG
YIMSAAEKVSKSPSLLGELKSIPSAEARKILLSFTGIGEKVADCILLYSGLDRNAFPIDR
WVKRVMETLYFKKETDVKTIRAFSRDYFGELSGIAQQYLFYYARENKIGL
NT seq 873 nt   +upstreamnt  +downstreamnt
atgtaccgtattatttcaacagacaataataatcttacggttcggatagatgattttaat
ccctcccatacttttctgtgcggacaatgtttccgctggaatcaggaagacgaagggaca
tggtccggcgttgccctcggccgtttcgttaggcttaaatgggacggcgaattatgcaca
ttttttgacatgaccgaaaaggaattcattgaaaaatgggtggattattttgatcttaat
accgattacggagaaataaaaaaaattctcgccggcaaggatgaacatttaagggaagcg
gtatccttcggctacgggatacgccttctgcgccaggatctgtgggaggtaatgctgtca
tttatcatatcccagaacaaccaaataccaaggataaaaaaaataatagaaacactgagc
gagcattacgggcagaaaatttccggcgcagacaacaggtacaccttcccagacgctttt
tcccttgcccgtgcaaacattgaagaccttaagatatgccgtccgggttaccgcctgggg
tatatcatgtctgcggcagaaaaggtgtcgaaatcgccttcgcttcttggggaactgaaa
agcattccctccgctgaagcgcggaaaatacttctgtcttttacaggaataggagaaaag
gttgccgactgtattcttctttacagcgggcttgacaggaacgccttcccgattgacagg
tgggtgaaacgggtaatggaaaccctgtactttaaaaaggaaaccgatgtaaagacaatc
cgcgccttttcacgggattatttcggagaactttcgggcattgcgcagcagtatcttttt
tactacgcccgcgagaacaaaatcggtttgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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