KEGG T00474: Cthe

Acetivibrio thermocellus ATCC 27405: Cthe_0777

Entry

Cthe_0777         CDS       T00474

Name

(GenBank) DNA mismatch repair protein MutS

K03555

DNA mismatch repair protein MutS

Organism

cth Acetivibrio thermocellus ATCC 27405

Pathway

cth03430

Mismatch repair

Brite

KEGG Orthology (KO) [BR:cth00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Cthe_0777
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cth03400]
    Cthe_0777
DNA repair and recombination proteins [BR:cth03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     Cthe_0777

SSDB

Motif

Pfam:

MutS_V MutS_III MutS_I MutS_IV MutS_II IntS14_C AAA_27 AAA_14 AAA_29

Other DBs

NCBI-ProteinID:

ABN52012

UniProt:

A3DDI3

Position

complement(939329..941941)

AA seq 870 aa
MASLTPMMQQYLEIKEQYKDCILFFRLGDFYEMFFSDAEVASRELEITLTGKDCGLEERA
PMCGVPFHSADSYIAKLISKGYKVAICEQIEDPALAKGLVKRDVIRIVTPGTVTDSAMLD
EKKNNYLMSIYKNKNYYGIACVDLTTGEFLSTHITFGNTFNKLMDEIAKFSPSEIVVNGE
FFHDENIKKTLKQRFDVYISGLEDKFFEKEFSIQKVRNYFKDYVIEENAFDLYINASGAL
LEYLEQTQKVNLSHIQNFNVYRIEEYMILDMATRRNLELTETMREKNRKGSLLWVLDRTM
TSMGGRTLRKWIEQPLINLHDIKDRLDAVNEFKERFMIRSEVRELLRAVYDIERLMTKVI
LGSANCRDLISIKHSIGQVPYIKELLRDLKADLNVLSYNELDTLTDVYEIIDKAIVDDPP
VAVKEGGIIKEGFNEEVDRLRSASKDGKKWIAHLESKERERTGIKNLKVGFNKVFGYYIE
VTKSYYSQVPDDYIRKQTLANCERYITPELKEIENTVLGAEDRLVELEYQIFVDVRNKVA
KEINRLKTTARSLARIDVLCSLAEVADRESYTMPEVTDDDKIEIKDGRHPVVEKIIGQEA
FVPNDTYLDMDENQIAIITGPNMAGKSTYMRQVALIVLMAQIGSFVPAKSAKIGIVDRIF
TRVGASDDLAAGQSTFMVEMSEVANILGNATSKSLLVLDEIGRGTSTYDGLSIAWAVIEY
IGEKIGARTLFATHYHELTELEERIEGIKNYCISVEEKGEDIIFLRKILRGGADNSYGVQ
VARLAGIPDPVIHRAKEILKKLEDADITRKEKRITRRKQPIEGQIDVFTFNAAQRSYDEV
LNELKSLDITTLTPLDAINVLYNLQKKVKG

NT seq 2613 nt +upstreamnt +downstreamnt
atggcttcattgacacctatgatgcaacagtatcttgaaataaaggagcagtacaaggac
tgtatcctttttttcagattgggagacttttatgaaatgtttttctctgacgcggaagta
gcttcaagggaactggaaataacgcttacgggaaaagattgcggccttgaagagagagct
cccatgtgcggagtgccttttcattcagcggattcatatattgcgaaactgattagcaaa
ggttataaagttgcgatatgtgagcagattgaagatcctgcgctggcaaaaggattggtc
aagagggacgtaatcaggattgttactcccggtacagtgaccgattccgctatgttggat
gaaaaaaagaataactatcttatgtcgatttataaaaacaaaaactattacggtattgca
tgtgttgatcttaccacaggagagtttttgtcgacacacattaccttcggcaacactttc
aacaaattaatggatgaaatagcgaaattctcaccatcggaaattgttgtaaacggtgag
ttttttcatgacgaaaacatcaaaaagactttaaaacaaaggtttgatgtttatatctcc
ggtttggaggacaaattttttgaaaaggagttttccatacagaaggtaagaaattatttt
aaggattatgtgattgaagaaaatgcgtttgatttatacataaatgcttccggagctctt
ttggaatatttggagcagacgcagaaagtgaatttaagccatattcagaattttaacgtc
tacaggattgaagagtacatgattctggacatggccaccagaagaaaccttgaacttacg
gagaccatgagggaaaagaacagaaaaggctcccttctttgggttttggacagaaccatg
acctccatgggcggaagaaccctgagaaaatggattgaacagccccttataaacctccat
gatataaaggacaggcttgatgcggtaaacgagtttaaagaaaggtttatgataagaagc
gaagtacgggagcttttaagagcggtttatgacattgagaggctgatgacaaaggttatt
ctgggaagtgccaattgccgcgatttgatatcgataaaacactctatcggacaggttccg
tatataaaggagcttcttcgtgatttaaaagccgatcttaatgttttaagctacaatgaa
ttggatacactaactgatgtgtatgaaattattgacaaggctatagtcgatgacccgcct
gttgcggttaaagaaggcggaatcataaaagaaggttttaatgaggaggtggacaggcta
agaagcgcatcaaaagacggaaagaagtggattgcacatttagagagcaaagagagggaa
agaaccggtattaaaaatttgaaagtgggatttaacaaggttttcggctattacattgaa
gtgaccaaatcctactactcacaagtaccggatgattatataaggaaacagaccttggcg
aactgcgaaaggtacataacaccggagctgaaggaaattgaaaataccgtattgggtgcg
gaggacaggcttgtagagcttgaatatcagatatttgtggatgtgaggaacaaggttgca
aaagaaataaacagattaaagaccacggcaagaagtcttgccagaatcgatgttttatgc
tcactggcggaagtggcggacagggaatcctatactatgccggaagtgaccgatgacgac
aaaattgaaattaaagacggaaggcatcctgtggtagagaagataatcgggcaggaagcc
tttgttcccaatgatacctatcttgacatggatgaaaaccaaattgctataattaccggg
cctaatatggcgggtaagtcgacatatatgcggcaggtggcgttgattgtgcttatggcc
caaataggaagctttgttcccgccaaaagtgccaaaataggcatagttgacaggatattt
acaagggtaggcgcttcggatgacctggcagcaggccagagtacctttatggtggaaatg
tccgaagttgcgaatatccttggcaatgccacgtcaaaaagcctgttggtattggatgag
ataggcaggggtacaagcacctatgacggactgagtatcgcatgggctgtaattgagtat
atcggtgagaagataggggcaagaacgctctttgccacccattaccatgaacttaccgaa
ctggaagaaagaattgaaggaataaagaattattgcatatccgtggaggaaaagggagaa
gatataattttcttaagaaaaatactcaggggcggagccgacaacagctacggcgtgcag
gttgcaaggcttgcaggcataccggatcctgttattcacagggcaaaagaaatattaaaa
aaattggaagatgcggacataaccaggaaggaaaaacgtattacaaggagaaaacagccc
attgaggggcaaattgacgtatttacgtttaacgccgcccagagaagttatgatgaggtt
ctgaatgaattaaagagtcttgatattacgactttgacaccgcttgatgcaataaatgta
ttatacaatcttcaaaaaaaggtaaaagggtag

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (197)   
   KEGG ORTHOLOGY (1)   
   RefGene (194)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (212)   

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