KEGG   Candida tropicalis: CTRG_02220
Entry
CTRG_02220        CDS       T01115                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
ctp  Candida tropicalis
Pathway
ctp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ctp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CTRG_02220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctp03019]
    CTRG_02220
   03036 Chromosome and associated proteins [BR:ctp03036]
    CTRG_02220
Messenger RNA biogenesis [BR:ctp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CTRG_02220
Chromosome and associated proteins [BR:ctp03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    CTRG_02220
SSDB
Motif
Pfam: Nucleoporin2 Nucleoporin_FG Nup98_GLEBS
Other DBs
NCBI-GeneID: 8296923
NCBI-ProteinID: XP_002547923
UniProt: C5M9Q8
Position
Unknown
AA seq 1035 aa
MFGGSSTGFGGFGSNSTTTNSPFGGVGASSTNTGTSPFGASNTSTSGGIFGNAGNSSTGF
GNTSAFGSNTNTNTTSAFGSNTGGGLFGSSNNNASSSPFGQQNQQQQQNSAFGTANNTTS
AFGSSNTGGGLFGSKPATSTFGGFGAAGGNTSSPFGASTTNAFGGSAASDPNTNNGTAVK
PFSAYTEKDSANMTNIFQNICCMPEYKNFSFEELRLKDYEQGRRFPPAGANASTGFGNTA
GASTGGFGFGSSGNTGFGGTSGTSPFGGASNTAGGSAFGSAFGSKPAGASPFGGASTTTG
GAFGANNQNQSPFGSSNTGNAFGGGATSTFGSSGTSAFGKPSTGFGASTGGAFGSSNTGG
GLFGSGGGNTTGGAFGQQSSGFGAGNNNNSPFGQSNTGAFGAANNNSPFGQQNQQQQQSG
GGLFGGSGGNTAFGSNTGGSAFGGGTGFGSGTSTFGQQNNTAFGANKPATGFGSTTSGGL
FGQQSGASNTGGLFGQQNQNQNQQQQGGGLFGAKPTGTSMFGQSNANTGGIFGQQNQQQP
QQSGGLFGSKPATGGLFGGQQANQQQSGGLFGQQNQQQQQAGGGLFGAKPATGGATGGGL
FGAKPATGGLFGGQQNQQQPQQGGGLFGAKPATTLGGGTTSGGLFGNTQQQSTTGGGLFG
GGASSTLGGSSTTGGGLFGAKPATTFGSGGATGGGLFGGATTLQQPQQVQQTLANINSQN
PYGNNPLFQSITGGSTQAQQTNNVPQAKLIRAATPVKKSVTLGSTSQKITPLFKVSALPS
KKPIETVQDEVFKKKTDSLFSSATDQAIISSEIFKPKESFKNLVLDKSNAPTGLLPNQPY
SPSKPVTFVLDKSERPEIALSSTPEAVSREEKEIIKEQTPDGVKDVEEVVNKEGYWMSPS
ISELKKKSLVELKSIKGLKIGRKNYGELEFIEPVDLSSMVNFEDILGKLIIFCDHNCIIY
PDDNKPKPGEGLNLPAKITLEGCYPTNRADKLPIVDPKSEAVKAHVEVLKTMEGMKFISY
DPTNGNWTFEVKEVD
NT seq 3108 nt   +upstreamnt  +downstreamnt
atgtttggaggatcttcgactggatttggaggatttggatctaattcaacaacaaccaat
tcgcctttcggcggagttggtgcttcatcgaccaatactggaacatcaccatttggtgct
tcaaacacatcaacaagtgggggtatctttggtaatgcaggcaattcttctacaggtttt
ggtaatactagtgcatttggatctaataccaataccaataccactctggcgtttggaagt
aacactggtggtggcctttttggatcgtctaataacaatgcatcatcatcaccatttggc
caacaaaatcaacaacaacaacaaaattctgcatttggtacagcaaacaataccacatca
gcatttggatcatccaataccggtggtggcttatttggaagtaaaccagcaacttctact
tttggaggatttggtgcagctggaggaaatacttcatcaccttttggtgcatcaaccaca
aacgcctttggtggaagtgcagcatctgatccaaataccaacaatggtactgctgtaaaa
ccattcagtgcttatactgaaaaggattctgctaatatgaccaatattttccaaaacatt
tgttgtatgccagaatataaaaatttttcttttgaagaattgagattgaaagattatgaa
caaggaagaagattcccacctgccggtgctaatgctagtactggatttggtaatacagcc
ggtgcttctactggaggatttggatttggttcatcaggaaacactggttttggtggaact
tcaggaacctcgccatttggaggggcttccaataccgctggtggttctgcatttggctct
gcatttggtagtaaaccagctggtgcttcaccatttggtggtgcttcaactactactggt
ggtgcatttggggctaataaccaaaatcaatcaccatttggttcaagtaacactggaaat
gcttttggtggaggtgcgaccagcacttttggtagctcaggtactagtgcgtttggtaaa
ccttccactggttttggtgcttcaacaggaggggcatttggatcatctaacaccggtggt
ggattatttggtagtggagggggcaatacaaccggtggtgcctttggacaacaatcttct
ggatttggcgctggtaacaataacaattccccatttggacaaagcaatactggtgcattt
ggtgctgctaacaataattcaccatttggtcaacaaaatcaacaacagcaacaaagtggt
ggtgggttatttggaggttcaggtggtaataccgcatttggatctaatactggtggatct
gcatttggaggtggtaccggatttggatcaggtacaagtacatttggacaacagaacaat
actgcatttggtgctaataaaccagcaacagggtttggttcaactacatcagggggttta
tttggtcaacaaagtggtgcctcaaatactggtggtttatttggacaacaaaatcaaaat
caaaatcaacagcaacaaggtgggggattatttggtgctaaaccaacaggaacctcgatg
tttggccaaagcaatgccaatacaggaggtatttttggtcaacaaaaccaacaacaacca
caacaaagtggaggattattcggtagcaaacctgctacaggaggattatttggaggccaa
caggctaatcaacaacaatcaggaggattatttggtcaacaaaatcaacaacaacaacaa
gctggagggggtttgtttggagctaaaccagctacaggtggtgctacaggtgggggttta
tttggagccaaaccagccactggaggtttgtttgggggacaacaaaaccaacaacagcca
caacaaggtggtgggttgtttggagctaaaccagcaactactttaggtggaggtacaact
agcggtggattgtttggtaatacccagcaacaatctacaaccggtggtggattatttgga
ggtggtgcatcatctaccttaggaggatcttctactactggaggtgggttatttggtgct
aaacctgctacaacttttggaagtggtggtgctacaggaggtggtttatttggaggtgct
actacattacaacaacctcaacaagtacaacaaacattggccaatattaattctcaaaac
ccatacggtaacaatccgcttttccaatcaattactggcggctcaacacaagcacaacaa
accaacaatgtcccacaagctaaattaattagagcagctacaccagtaaagaagtctgtt
acattgggtagcacatcacaaaagatcaccccattattcaaggttagtgcattaccatca
aagaagcccatcgaaacagttcaagatgaagtttttaagaagaaaacagatagtttattt
tctagtgctactgaccaagccattatcagcagtgaaattttcaaaccaaaggaaagtttt
aagaatttggtattggataaatccaatgctcctactgggttattgccaaaccaaccatat
agtccaagtaaaccagttacttttgttttagataaatcagaaagaccagaaattgcattg
tcatctactcctgaagcagtttctagagaagagaaggaaattattaaagaacaaactcca
gacggagttaaagacgttgaagaagttgttaataaggaaggttactggatgtcaccatca
atttcagaattgaagaagaaatcacttgttgaattgaaatcaatcaaaggtttgaaaata
ggaagaaagaattatggtgaattagaatttattgaaccagttgatttatcatcaatggtt
aattttgaagatattttaggtaaattgattatattttgcgatcacaattgtattatatac
cctgatgataataaacctaaaccaggagaaggattgaatttaccagccaaaattacattg
gagggatgttatccaactaatagagcagacaaattaccaatagttgatccaaagagtgaa
gctgttaaagctcatgttgaagtattgaaaactatggaaggtatgaaatttattagttat
gatcctacaaatggtaattggacttttgaagttaaagaagttgattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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