KEGG   Candida tropicalis: CTRG_03196
Entry
CTRG_03196        CDS       T01115                                 
Name
(RefSeq) ribosome biogenesis ATPase RIX7
  KO
K14571  ribosome biogenesis ATPase
Organism
ctp  Candida tropicalis
Pathway
ctp03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ctp00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CTRG_03196
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ctp03009]
    CTRG_03196
Ribosome biogenesis [BR:ctp03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    CTRG_03196
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_16 AAA_5 AAA_22 AAA_14 AAA_2 AAA_33 AAA_28 TIP49 AAA_18 RNA_helicase ABC_tran nSTAND3 Mg_chelatase AAA_17 Zeta_toxin ATPase_2 AAA_25 Vps4_C Rad17 IstB_IS21 NACHT AAA_3 AAA_24 Cytidylate_kin2 AAA_7 NB-ARC Parvo_NS1 DUF5906 DUF815 TsaE SKI AAA_19 Sigma54_activat PduV-EutP MMR_HSR1 FeoB_N RsgA_GTPase CPT AAA_29
Other DBs
NCBI-GeneID: 8299824
NCBI-ProteinID: XP_002548900
UniProt: C5MAV4
Position
Unknown
AA seq 825 aa
MSKKKIITGSMDQKIYNLIHDLLEEQTEENKNALEDPENADPFSYIASSNSLTISQVLAY
VQMKDFQLKRMKRNNLEKSIANSLRLIRQDEAEELGKIGPGSDGGSNLENDIDEEDNDEG
RLMDVKDSNELNKSVVALWNLEDNQTVDSKDGDDHQMEDSTIGTKRKVKDNSKSQLKKQK
RKIDHTPPTADLSSLGGVETITTQLLEIIGLPILHPEIYTSTGVEPPRGVLLYGPPGCGK
TTLANALAGELKVPFFNISAPSIVSGMSGESEKKLRDLFEEAKSVAPCLIFMDEIDAITP
KRDGGAQREMERRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDRE
ICLTVPNEEQRISILKAMTKNIKLESGENFDYRELSKLTPGYVGADLKSLVTAAGITAIK
RIFETMSEAQEESSVQKDDSMDIDVTHSESNKELILQNFDKKSEVEKLSTIKKFLMKHPD
PLSQQQLDPLAITYEDFVNALPTVQPSAKREGFATVPDVTWQNVGALSSIRMELHMCIVQ
PIKKPEIYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGES
ERAVRQVFQRARASTPCIIFFDELDALVPRRDNSMSESSSRVVNTLLTELDGLNDRKGVF
VIGATNRPDMIDPAMLRPGRLDKTLYIELPSPEERLEILKTIVRSNNSPLHSDVSLVSVS
QDPRCRNFSGADLSSLVKEAGVSALKKKFFTNQKIQDLDKSGFYQESSDEDKIFITAEDF
DYALSSIRPSVSDRDRVRYEKLNRKLGWNIIPEKENEEKEPQIAS
NT seq 2478 nt   +upstreamnt  +downstreamnt
atgtcaaagaagaaaatcattacaggatctatggatcagaaaatctataatttgattcat
gatttgcttgaagagcagacagaagagaataagaatgctttagaagatccagaaaatgct
gatccgttttcatacatagcatcctccaatagcctaaccatttcacaagtattggcttac
gtacagatgaaagactttcagttaaagagaatgaagagaaataatcttgaaaaatcgatt
gccaacagtttgagactaatacgtcaagatgaggcagaagaacttggtaaaattggccct
ggaagcgatggtggttcaaatttggaaaatgatattgacgaagaagacaatgatgaaggt
cgtcttatggatgttaaagacctgaatgaattaaataaatcagttgtagccttatggaac
ttggaagataatcagacggtggatagcaaggatggcgacgatcatcaaatggaagattcc
actattggcaccaaaagaaaagtcaaagataattccaagtctcaattgaaaaaacaaaaa
aggaaaatcgaccatactcctccaactgcagacctttcctctcttggtggtgttgagacc
attaccacacaattacttgagattattgggttgcctatacttcatcctgaaatctatact
agcaccggtgtggaaccaccaaggggtgtacttttgtacggtccaccagggtgtgggaag
accacccttgccaacgcattagccggtgaattgaaagttccattcttcaacatttctgct
ccatccattgtctcaggaatgtcgggagagtctgaaaagaagttgcgtgatttgtttgag
gaggctaaatccgtggctccttgtcttattttcatggacgaaatagatgctattacacca
aagagagatggtggtgcacagagggaaatggaaagaagaattgtagcacaactattaacc
ttgatggatgagttgactttggaaaaaacaggcggtaaacctgttgttgtaatcggggcc
acaaatagacctgattctttagactctgctcttcgacgtgcgggaagatttgatagagaa
atatgtttaactgttcctaacgaagagcaaagaatttcaattctcaaggcaatgacaaag
aacatcaaactcgagagtggtgagaattttgattatagagaattatccaagttgactcct
ggatatgttggggccgatcttaaaagtttggtgactgctgcggggatcacagctatcaag
agaatttttgaaacaatgagtgaagcacaagaagaatcctcagttcagaaagatgattcc
atggacattgacgttacacattccgaatcaaataaagaactcattttgcaaaactttgat
aagaagtccgaagttgagaagttatctaccatcaagaagtttttaatgaagcatccagac
ccattaagtcagcaacaattggatccattggcgatcacatacgaagactttgtcaatgct
cttccaacagtacaacctagtgccaagagagaaggttttgcaacagttccagacgtcaca
tggcaaaatgtcggggcactttcaagcatcagaatggagttgcatatgtgtattgtccaa
ccaatcaagaaaccagagatttatttgaaagtgggtattgctgcacctgctggtgtcttg
atgtggggtcctcctggatgtggtaaaactttgcttgcaaaagctgttgccaatgaatca
agagcaaactttatttctattaaaggtccagagctcttaaacaaatatgttggtgaatca
gaaagagccgtgcgacaagttttccaaagagcccgagcatctactccatgtattatattc
tttgatgaattggatgccttggtaccgcgaagagacaattcaatgtccgagtcaagctcc
agagtggtgaatacgttgttgactgaattggatgggttgaatgacagaaagggtgtgttt
gtaattggtgccaccaatagacccgatatgattgatccggcaatgttaagaccagggaga
ttggacaaaaccttgtatattgagttgccttcaccagaagaaagattagaaatcttgaag
accattgtgagatcaaacaatagtcctttgcattcagatgttctgcttgtatctgtttca
caagatccaagatgtagaaacttttctggggctgatttgtcctcattggttaaagaggct
ggtgtttctgcgttgaagaagaagtttttcaccaaccaaaagattcaagacttggacaag
tcagggttttatcaagagtcatccgacgaagacaaaatattcattactgctgaagatttt
gactatgcactttcttcaatcagaccaagtgtgagcgatagagatcgtgtacgttatgaa
aagttgaacaggaaattgggttggaatataattcctgaaaaggagaatgaagagaaagaa
ccacaaattgcaagttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (42)   
   Pfam (42)   
All databases (53)   

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