KEGG   Cupriavidus necator NH9: BJN34_05550
Entry
BJN34_05550       CDS       T05121                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
cuh  Cupriavidus necator NH9
Pathway
cuh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cuh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BJN34_05550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cuh03019]
    BJN34_05550
   03016 Transfer RNA biogenesis [BR:cuh03016]
    BJN34_05550
Enzymes [BR:cuh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     BJN34_05550
Messenger RNA biogenesis [BR:cuh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BJN34_05550
Transfer RNA biogenesis [BR:cuh03016]
 Prokaryotic type
  tRNA degradation factors
   BJN34_05550
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase S1 KH_1 KH_2 KhpA-B_KH DUF5813 DUF4342
Other DBs
NCBI-ProteinID: AQV93357
UniProt: A0A1U9ULP4
Position
1:1208461..1210632
AA seq 723 aa
MSMFNKVVKEFQWGQHTVRMETGEIARQAGGAVLVDVEDTVVLATVVAAKSPKPGQDFFP
LTVDYIEKTYAAGKIPGGFFKREGRPSENETLTSRLIDRPLRPLFPEGFYNDVQVVIHVV
SLNPEVPADIPALIGASAALAVSGIPFNGPVGAARVGYKDGQYLLNPTRSQIAASDLDLV
VAGTERAVLMVESEANQLSEEIMLGAVVYGHEQMQIAINAIHELVREGGKPEWDWAPAAK
NEPLIAKVTEVALPLLQEAYQLRQKSARSQKLKEVSANVAAALEAAGVQADKVEVGNIMF
DLEAKIVRGQVLSGEPRIDGRDTRTVRPIEIRSSVLPRAHGSALFTRGETQALVVATLGT
KSDEQIIDALAGEYRDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALIPVLPKD
DEFAYTIRLVSEITESNGSSSMASVCGGCLALMDAGVPVKAHVAGVAMGLILEGNKFAVL
TDILGDEDHLGDMDFKVAGTDNGITALQMDIKVQGITKEIMQVALAQAKEGRLHILHKMQ
EAMGHARTELSAHAPRMITMKIHPDKIREVIGKGGSTIQALTKETGTTIDIQEDGTITIA
STSTDGMAEAKRRIEGITAEAEVGKIYAGTVLKLLDFGAIVNILPGKDGLLHISEIVNER
VKDIKDWLKEGQHVRVKLIQADEKGRLRLSLKAALAEEGGSISPINAGEAAAPAAPAEGS
EQQ
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgtccatgttcaacaaggtcgtcaaggaattccagtggggccagcacacggtccgcatg
gaaaccggcgaaatcgcccgccaggccggcggtgcggtgctggtcgatgtggaagacacc
gtggtgctggcgaccgtggttgccgccaagagcccgaagccgggccaggacttcttcccg
ctgaccgtcgactacatcgagaagacctacgccgccggcaagatccccggcggcttcttc
aagcgtgaaggccgtccgtcggaaaacgagaccctgacctcgcgcctgatcgaccgtccg
ctgcgcccgctgttcccggaaggcttctacaacgacgtccaggtggtgatccacgtggtc
tcgctgaacccggaagtgcccgccgacatccccgcgctgatcggcgcatcggccgcgctg
gccgtgtcgggcatcccgttcaacggcccggtgggcgccgcgcgcgtgggctacaaggac
ggccagtacctgctgaacccgacccgctcgcagatcgccgcctcggacctggacctggtg
gtcgccggtaccgagcgcgccgtgctgatggtggaatcggaagccaaccagctgtccgaa
gagatcatgctgggcgccgtggtctatggccacgagcagatgcagatcgcgatcaacgcg
atccatgagctggtgcgcgaaggcggcaagcccgagtgggactgggccccggccgccaag
aacgagccgctgatcgccaaggtcaccgaagtggcactgccgctgctgcaggaagcctac
cagctgcgccagaagtcggcccgcagccagaagctgaaagaagtgtcggccaacgtggcc
gccgcgctggaagccgccggcgtccaggccgacaaggtggaagtcggcaacatcatgttc
gacctggaagccaagatcgtccgtggccaggtcctgagcggcgagccgcgcatcgacggc
cgcgatacccgcaccgtgcgcccgatcgagatccgttcgtcggtgctgccgcgcgcgcac
ggctcggcgctgttcacccgcggcgagacgcaggcgctggtggtggccacgctgggcacc
aagagcgacgagcagatcatcgacgcgctggccggcgaataccgcgaccgcttcatgctc
cactacaacatgcccccgttcgccactggtgaaacgggtcgcgtgggcagcccgaagcgc
cgcgaaatcggccatggccgcctggccaagcgcgcactgatcccggtgctgccgaaggac
gatgaattcgcctacaccatccgcctggtttcggaaatcaccgagtccaacggctcgtcg
tcgatggcttcggtctgcggcggctgcctggcactgatggacgccggcgttccggtcaag
gcgcacgtggccggcgtggccatgggcctgatcctggaaggcaacaagttcgccgtgctg
accgacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtggcgggtacc
gacaacggcatcaccgcgctgcagatggacatcaaggtccagggcatcaccaaggagatc
atgcaggtcgcgctggcgcaggccaaggaaggccgtctgcacatcctgcacaagatgcag
gaagcgatgggccatgcccgcaccgagctgtcggcgcacgcgccgcgcatgatcaccatg
aagatccatccggacaagatccgcgaagtgatcggcaagggcggctcgaccatccaggcg
ctgaccaaggaaaccggcaccaccatcgacatccaggaagacggcacgatcacgatcgcg
tcgacctcgaccgacggcatggccgaagccaagcgccgcatcgagggcatcaccgcggaa
gccgaagtgggcaagatctacgccggcaccgtgctgaagctgctggacttcggcgccatc
gtcaacatcctgccgggcaaggatggcctgctgcacatctcggaaatcgtcaacgagcgt
gtgaaggacatcaaggactggctgaaggaaggccagcatgtccgcgtcaagctgatccag
gctgacgagaagggccgcctgcgcctgtcgctgaaggccgcgctggccgaagagggcggc
agcatcagcccgatcaacgctggcgaagccgccgcgccggctgccccggccgaaggctcg
gaacagcagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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