KEGG   Cyprinodon variegatus (sheepshead minnow): 107088262
Entry
107088262         CDS       T06110                                 
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
  KO
K14778  ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7]
Organism
cvg  Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:cvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cvg03009]
    107088262 (ddx49)
Enzymes [BR:cvg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     107088262 (ddx49)
Ribosome biogenesis [BR:cvg03009]
 Eukaryotic type
  90S particles
   Helicases
    107088262 (ddx49)
SSDB
Motif
Pfam: DEAD Helicase_C AAA_22 P-loop_SecA
Other DBs
NCBI-GeneID: 107088262
NCBI-ProteinID: XP_015235795
Ensembl: ENSCVAG00000010466
UniProt: A0A3Q2CSD7
Position
Unknown
AA seq 474 aa
MADLSSLGLSDWLVRQCKQLGINKPTPVQENCVPAILEGRDCMGCAKTGSGKTAAFVLPV
LQKLSEEPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKECIIVGGMDMVSQALELTNQ
PHVVVATPGRLADHIRSSNTFSMSKIKFLILDEADRLLEQGCTDFTKDLEVILGVLPAKR
QTLLFSATLTDTLQELKSIAMNKPFFWESTSETRTVEELDQRYILTPEKVKDAYLVHLIQ
TFTDQHDDWSIIIFTNTCKSCQILTMMLRAFNFPTISLHSMMKQKQRFANLAKFKASVYR
ILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDIHLV
HSIEEQTKTKLKEYPMEEKEVLKILTQVNVTRRECEIRLESTDFDEKKEINKRKQLILEG
KDPDLEAKRKAELEKIRSQKKKFKQKIQDSIQRQKHGQMKKNRPKSKKAESAAS
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggccgacctgtcgtctttaggtctgtcagactggttggtgaggcaatgtaaacagctg
ggaatcaacaaacccactcctgttcaggaaaactgcgtcccagccatcctggaaggacgt
gactgtatgggctgcgccaagactggaagtggaaagacggcggcgtttgtgttgcccgtg
ctgcagaaactatcagaggagccctatggcatcttctgtctggtgctcactcctaccagg
gagctggcctatcagattgcagagcagttcagagttctggggaagcctctgggtttgaaa
gagtgcatcatcgttggaggaatggacatggtgagccaggccctggagctaaccaatcag
cctcatgttgtcgtagcaacaccgggtcggctggccgatcacatccgcagctccaacact
ttcagcatgagcaagatcaagttcttgattcttgatgaggcggaccggctgctggagcag
ggttgtactgacttcaccaaagacctggaggtgatcctgggcgtcttaccagccaaacgt
cagacgctgctgttcagcgccacgctgacagacaccctgcaggagcttaagagcatcgcc
atgaacaaacctttcttctgggagagcacatcagaaacgaggacagtggaggagctggac
cagagatacatcctcactccagagaaggtgaaggacgcttacttggtccatctgatccag
acatttacggaccagcatgacgactggtccatcatcatcttcaccaacacgtgcaagagc
tgccagattctgactatgatgctgcgggcttttaactttcctacaatctctctgcactca
atgatgaaacagaaacaacggttcgccaatcttgccaagttcaaggccagcgtctatagg
atcctgattgcgacggatgtagcttccagggggttggatattccaactgtgcaggtcgtc
attaaccataacaccccagggcttccaaagatctacatccatagagtggggagaaccgca
agagcagggagaaacggagtgtccatcacactggtgacgcagtacgacatccatctggtc
cattcgatcgaggaacagacaaaaactaagttgaaggaatatcctatggaggagaaggaa
gtcctaaagatcctgactcaagtcaacgtgactcgacgcgagtgtgaaattagacttgaa
tcgacagactttgatgagaaaaaggagattaacaagaggaaacagctgatcttggagggg
aaggacccagacctggaagccaagaggaaggcagagctggaaaagatcaggagccaaaag
aagaaatttaaacagaaaatccaagacagcattcagagacaaaaacatggacagatgaag
aagaaccggcctaaaagcaaaaaggcagagtcggcagcatcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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