KEGG   Desulfarculus baarsii: Deba_3225
Entry
Deba_3225         CDS       T01284                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
dbr  Desulfarculus baarsii
Pathway
dbr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Deba_3225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dbr03400]
    Deba_3225
Enzymes [BR:dbr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Deba_3225
DNA repair and recombination proteins [BR:dbr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Deba_3225
SSDB
Motif
Pfam: PriA_C PriA_3primeBD DEAD Helicase_C PriA_CRR ResIII AAA_16 RUBY_RBDX SDF
Other DBs
NCBI-ProteinID: ADK86578
UniProt: E1QLZ3
Position
3566894..3569146
AA seq 750 aa
MSAAQNLGWRVEAAVAAPLWKALSYAAPDDLVPLIGPLCRMIAPLRGRRALAFALARPER
GDVSGLRPIHDVLEAAGGPQMIPPALLNFYQRAAAHYHAPLGQMLAMSLPAGLGALGAAG
VPAASQVAVARLSAKALGQPPELRGQAGELFDYLRQNGPTALPELRRRWPRATALVKGLE
SAGWLAVGQQPVCKDILGRPIGHEPAPERLSAEQEAAVAAIGAAARARRFEPFLLYGVTS
SGKSEVYAQACRQALEQGRAALVLAPEIGLCLRLQGLLAQRLGAETVAVLHSGLSPAARR
DQWARIAAGRARVVVGARSAVFAPLDDPGVICVDEEQDEAYKHEDGPRYHARDLALLRGQ
EQACPVVLGTATPALTTLARARNGGLTTLAMTSRVAGASLPKVEVVDLRSCGRLTAGFLS
PRLHQALRQETAAGRQAVLFINRRGFAPALLCPACGKTVGCPHCSLALCLHLDPPRLICH
ACGHLARPPAQCPSCGADGAQMKPLGLGSEAVVQALARLEPQLRLARLDRDAAGSPAKLG
EILRAMADRRLDVIVGTQMITKGHHFPGIGLVGVLLADQALGMPDFRAAERAYALLTQAA
GRAGRGQDQGRVIIQTYDPAHHAVRAAASHKPEIFYDHELAERRALGYPPFCRITLLRLE
AKDQAVAQQTALALGRELRAAQGDLAADIQTLGPAPAPLAKAKDHFRWQIMLKAPSAAAA
SRLLNLALHRLGPLPAGARLLVDVDPLNMA
NT seq 2253 nt   +upstreamnt  +downstreamnt
atgagcgccgcccaaaacctgggctggcgagtggaggcggcggtggccgcgccgctgtgg
aaggccctgagctacgccgcgcccgatgatcttgtcccgctgattgggcccctttgccgc
atgatcgcgccgctgcgcggccggcgcgcgctggccttcgccctggcccggcccgagcgc
ggcgacgtcagcggcctgcggcccatccacgacgtgctggaggccgccggcggcccgcag
atgatcccaccggcgcttttgaatttttatcaacgggcggcggcccactatcacgcgccc
ttgggccagatgctggccatgtcgctgccggcgggcttgggcgcgctgggcgcggccggc
gtgccggcggccagccaggtcgccgtggcgcggctttcggccaaggccctgggtcagccg
ccggagctgcgcggtcaagctggcgaattatttgactatctgcgccaaaatggccccacc
gccctgcccgagctgcgccgtcggtggccccgggccacggccctggtcaagggcctggag
tcggccggttggctggccgtgggccagcagccggtctgcaaggatatcctgggccggccc
atcggccacgagcccgcgccagagcgccttagcgccgagcaagaggccgccgtggcggcc
atcggcgcggcggcgcgggcgcggcgcttcgagccgtttttgctctatggcgtgaccagc
tcgggcaagagcgaggtctacgcccaggcctgtcgccaggccttggagcaggggcgcgcc
gcgctggtgctggccccggagatcggcctgtgcctgcgcctgcaagggctgctggcccag
cgcctgggggccgagacggtggccgtgctgcactcgggcctgagcccggcggcccggcgc
gatcagtgggcgcgcatcgccgccggtcgggcgcgggtggtggtgggcgcgcgctcggcg
gtgttcgcgccgctggacgacccgggcgtgatctgcgtcgacgaggaacaggacgaggcc
tacaaacacgaggacggcccgcgctatcacgcccgcgatctggccctgctgcgcggccag
gaacaggcctgcccggtagtcttgggcacggccaccccggcgctgaccaccctggcccgg
gccagaaacggcggcctgaccaccctggccatgaccagccgcgtggccggggccagcctg
cccaaggtcgaggtggtcgatctgcgctcctgcggccggctgaccgccggctttctcagc
ccgcgcctgcaccaggccctgcgccaggagaccgccgccggccgtcaggcggtgttgttc
atcaaccgtcgcggtttcgccccggccctgctttgcccggcctgcggcaagaccgtgggt
tgcccccattgcagcctggccctgtgcctgcacctcgatccgccccggctgatctgccac
gcctgtggccacctggcccggccgccggcccaatgccccagttgcggggccgacggcgcg
caaatgaaacccctgggcctgggctccgaggccgtggtccaggccctggcccggttggag
ccccaactgcgcctggccaggctcgaccgcgacgccgccggcagcccggccaagctgggc
gagatcctgcgggccatggccgatcgccgcctggacgtgatcgtcggcacccagatgatc
accaaaggccatcacttccccggcatcggcctggtgggcgtgctgctggccgatcaggcc
ctgggcatgcccgacttccgcgccgccgaacgggcctacgccctgctgacccaggccgcc
ggtcgggccggccgcggccaggaccagggtcgggtgatcatccagacctacgacccggcc
caccacgccgtgcgcgccgccgccagccacaagcccgagatcttctacgaccacgagttg
gccgaacgccgcgccctgggctatccgcccttttgccgcatcacgctgttgcgcctggag
gccaaagaccaagccgtcgcccagcaaacggccctggccctgggccgtgaactgcgcgcc
gcccaaggcgacctcgccgccgacatccagaccctgggcccggccccggcccccctggcc
aaggccaaggatcacttccgctggcagatcatgctcaaggcccccagcgccgcggcggcc
tcgcgcctgctcaacctggccctgcaccgcctgggcccgctgccggccggcgcgcggctg
ctggtggacgtggacccgctgaacatggcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (52)   

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