KEGG   Dehalobacter sp. CF: DCF50_p2228
Entry
DCF50_p2228       CDS       T02279                                 
Name
(GenBank) ATP-dependent nuclease, subunit A
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
dec  Dehalobacter sp. CF
Brite
KEGG Orthology (KO) [BR:dec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dec03400]
    DCF50_p2228
Enzymes [BR:dec01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DCF50_p2228
DNA repair and recombination proteins [BR:dec03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     DCF50_p2228
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PDDEXK_1 DEAD ResIII AAA_12 AAA_30 AAA_11
Other DBs
NCBI-ProteinID: AFV06231
UniProt: K4L6L0
Position
complement(2286344..2290426)
AA seq 1360 aa
MTDQTKWTNEQWEAITAKDCNLLVAAAAGAGKTAVLVERIIQRITDSHDPVDIDRLLVVT
FTNAAAAEMRERIAEALAAVQESNPGSSNMQKQLTLLSKASITTIHSFCLEVIRSNFQAI
NIDPSFRIADETETMLMKMEVLNDLFDEMYEENAENQDFFELLECYGGNRDDQALQDMVL
NLHTFIQSSPWPEKWLAEMTGRFGIPEGTDFSQTCWGKVLLKSIGLEIEGLIQNMQAAVA
LLQPGAGLDKYRPVFEEEYCFLQHIRELCLEERNARWDDLGQTVRNYPFQRLPSAGKDAD
KAVQEQVKEIRDQVKKKIGKLKERALAADSAEIRADLQTLRPLMQCLSRLVVEFERRYAL
KKNGKSLVDFNDLEHFCLEILTVQDETGAYVPSEAAKRYQERFAEILVDEYQDSNLVQEI
LLQMISRTGSARPNVFMVGDVKQSIYRFRQAKPELFLEKYHSYSPEQGASHRKICLYKNF
RSRREVVDAVNYIFRQIMSVQVGELDYNDNEALNPGAVFAENDQEQLTVGGSVEFHLIQT
GDPERLDQENGFSDSSGQEEQELTEFADASNGLSDETEQIDPGMLDAIQCEARFAVRRIE
ELFQPDEQGRRTAVYDKESKAYRELRCSDIVILLRTTRNWSEVFTEELTAAGIPAFADTG
TGFFKSSEVQVILSLLQIIDNPLQDIPLLAVLRSPLAAFSSDELAGLRLNRRHVPIYEAI
KQLVEETAEEDTPEPESRKPDNELESSKPEIKFQNQLVDGKSEIKKMKNATPEKETLKKK
AAMFLNNLHRWRDTAQYLSADRLLWQLYTETGYYGIVGAMPGGVQRQANLRILFERARQY
EETSFKGLFNFINFIDKLKSNQGDFGSAKILGENDNVVRIMSIHKSKGLEFPVVILAGCG
KKFNFQDLNRSILFHQELGLGPDVADPRLRIAYPSVPKYAIREQIRMETLSEEMRILYVA
LTRAREKLIISGAVSNARKALNKWSKAAAGDQEKLPAYEVFKGEKYLDWIGPALIKHRGC
STATRTGWLGYPTDVTEGAPGNGLLDDPSEWQIRMWTKNELLGRSAVQEQEEETFIRWLA
GLHQETEDHGDTEVNDDKNDNNDSRDNRDNNDSDSDRLHRKDVKKEIARRLGWEYTFTAS
TRIPPKVSVTELKRRLEAELSEEMGLGLANGSASLPQLIKKPLFLEEKKGLNAAEAGTIL
HFVMQHLDIQHDDIPSQIQEMVKKELLTEQQAESVDPEKIRLFLESPLGCRMKASGSVNR
EVRFNIEIPCREVFSDMAAGVCGQEVVLLQGIIDCYFEEEDGIVLVDYKTDQIPEGGSRI
ILERYRQQILYYARALEMLTGKKVKEKYFYLFSCGEVLQS
NT seq 4083 nt   +upstreamnt  +downstreamnt
atgactgatcagacgaaatggacgaatgaacaatgggaagcaattacggccaaggactgc
aacctgctggttgcagcggccgccggggccggcaagacggccgtgcttgtggaacggatc
atccaaagaattacagacagccatgatcctgtggacattgaccggctgctcgtggtgacg
tttaccaatgcagctgcggcagagatgagggaaaggattgccgaagcgctcgctgcagta
caggaaagcaatccggggtcttccaatatgcaaaaacagctgacgctgttgagcaaagcc
agtattacaaccattcactcgttttgtcttgaggtcatccgcagtaacttccaggccatt
aatattgatccgtctttccggattgccgatgagacggaaacgatgctgatgaaaatggaa
gtactcaatgacctgttcgatgaaatgtatgaagagaatgccgagaatcaggattttttt
gaacttttagagtgttatggcggcaacagggacgatcaggccttacaggacatggtgctg
aatttgcatacgtttatacaaagcagtccctggccggaaaaatggcttgcagagatgaca
gggcgtttcggcatacccgaaggtacggatttcagtcagacctgctggggaaaagtcctg
cttaaaagtatcgggctcgaaattgagggactgatacagaatatgcaggccgcagttgcg
cttctgcagcctggtgccggactggataaataccgtcctgtcttcgaggaagaatactgc
tttttacagcatatccgggagctttgtctggaagagcgtaatgccagatgggatgacctt
ggccaaacagtccggaactacccgtttcaaagactgccgtcagccggcaaagatgcggat
aaagctgttcaggagcaggtcaaagaaatccgggatcaggtcaaaaagaagattggtaaa
ctgaaagaacgggctctggcagctgattcggcagaaatcagagcagatttgcagaccctt
cggccgctgatgcagtgtctgagcagactggttgttgaatttgaacgcagatatgcgttg
aaaaagaatggcaagtctctggtggattttaatgacctggagcatttttgcctcgaaatt
ctgacggtgcaggatgaaacgggagcgtatgtgccgtctgaagcagccaaacgctatcag
gaacgtttcgcggaaattctggtcgatgagtaccaggacagcaatctggtccaggagatt
ttgcttcagatgatttcccgcacaggatcagccagaccgaatgtctttatggtcggagat
gtcaaacagagtatttacagattcagacaggctaaaccggaactgtttctggagaagtat
cacagttactctccggaacaaggcgccagccatcggaaaatttgcctgtataagaatttc
cgcagccgccgggaagtggttgatgctgttaactacattttcaggcagatcatgtcggtg
caggtcggggaactggactacaatgacaacgaggctttgaatccgggagccgtctttgcc
gaaaatgaccaggaacagctgactgttggcggatccgtagaatttcatcttattcaaaca
ggtgatccggagcggttggatcaggaaaacggattttctgacagttcaggtcaggaagaa
caggaattgacggagtttgcggacgcctcaaatggactctctgatgaaacggaacagatt
gacccgggtatgctggatgcgatccagtgtgaagcccgttttgcggtacgaaggatagag
gagctattccagccggacgaacagggcagacggacggcagtttatgataaggaaagcaaa
gcataccgagagctgcgttgcagcgacattgtcattcttctccggaccacccggaactgg
tccgaggtattcacagaggaactgacggcggctggcatccctgcctttgctgataccggc
acaggatttttcaagtcttccgaggtacaggtaatcctgtcactgctccagatcattgat
aatccgttgcaggatattccgttattggccgttctgagatcgccgctggccgctttctca
tctgatgaactcgccgggctgcggcttaacagacggcatgtgccaatctatgaggcgatc
aaacagttggtggaagagacggcagaagaggatacccctgaaccagagagcagaaagcct
gataacgaattagagagcagtaagccggaaatcaaatttcagaaccaactcgtggacgga
aaatctgagataaaaaagatgaaaaacgcaacacctgaaaaagaaacgctgaaaaagaaa
gcagcaatgttcctgaacaaccttcacagatggcgggacaccgctcaatatctgtctgcc
gacaggctgctctggcagctttataccgagacaggctattatgggattgtcggagcgatg
cctgggggcgtgcagcgtcaggccaatctccggattctatttgaacgggccagacaatat
gaggaaacgagctttaaagggctgttcaattttattaatttcattgacaagctaaaaagc
aaccagggtgattttggcagtgctaaaatccttggtgaaaatgataatgtcgtccggatt
atgagtattcataaaagcaaagggctggaattcccggtcgttattttggccggatgcggc
aagaaatttaactttcaggatttaaacaggagtattttatttcaccaggagcttggactc
ggtcctgacgttgcggatccgaggctcaggatagcgtatccgtctgttcctaaatatgca
attcgggaacaaatcaggatggagaccctgtcggaagaaatgcggattctctatgtggcc
ttgaccagagccagggaaaagctgattatctccggagcagtttccaatgcccggaaggcg
ttgaataaatggtctaaagctgctgcaggtgatcaggaaaagctgcctgcatacgaagta
ttcaaaggagaaaaatatctggactggatcgggccggcactcataaagcaccggggctgc
agcactgccactcggaccggctggctcgggtatcctaccgatgtaacagagggagcaccg
ggaaacggtctgcttgacgatccgtccgaatggcagatccgcatgtggacaaaaaatgag
cttcttggcagatcagccgttcaggaacaggaagaagaaacattcatccgatggctggcc
ggtttacatcaggagaccgaagatcacggtgataccgaagttaatgatgataaaaacgat
aataacgatagtagagataatcgtgataataacgacagcgacagtgatcggctccaccgc
aaagatgtaaagaaagagattgcgcgaaggcttggctgggagtataccttcactgccagt
acccgaatcccgcccaaagtctctgtcaccgaactgaagagacggctggaagcggagctt
tcggaagagatggggctggggcttgcaaacggatcggcttccctgccgcagctgatcaaa
aagccgttatttctcgaagaaaagaaagggctgaatgcggcagaagccggaacaattttg
cattttgtcatgcagcacctggatattcaacacgatgatatcccaagtcagattcaggaa
atggttaaaaaagaactgcttacagagcagcaggccgaaagcgtcgatccggaaaagata
cgacttttcctcgaatctccgctcggatgcagaatgaaggcttcaggcagtgtgaaccgt
gaagtccgcttcaatatagaaataccatgccgggaagtattctccgacatggcggcaggt
gtctgcgggcaggaggtcgtcctgttacagggcattattgactgttattttgaggaagag
gatgggattgtcctggttgactataagacggaccagattccggaaggcggatcccgcatt
attctagaaaggtaccgccagcagattctctattacgccagggcgctggaaatgctgaca
gggaaaaaagtcaaagaaaagtacttttatctttttagctgcggcgaggtcttgcagtcc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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