KEGG   Devosia sp. H5989: XM25_21655
Entry
XM25_21655        CDS       T04003                                 
Name
(GenBank) ABC transporter ATP-binding protein
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
deq  Devosia sp. H5989
Pathway
deq02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:deq00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    XM25_21655
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:deq02000]
    XM25_21655
Transporters [BR:deq02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    XM25_21655
SSDB
Motif
Pfam: ABC_tran oligo_HPY AAA_21 SMC_N Mg_chelatase AAA_29 AAA_16 nSTAND1 PRK AAA_22 AAA_23 AAA nSTAND3 NB-ARC NACHT DUF87 RsgA_GTPase ABC_ATPase AAA_5 RNA_helicase AAA_18 ATP-synt_ab Zeta_toxin
Other DBs
NCBI-ProteinID: AKR58349
Position
complement(4407076..4408929)
AA seq 617 aa
MSISVPAMPLLTVRNLHIDIPTGDGDVHAVRDVSFSVEPEELFGIAGESGSGKSVLSQAI
LGLMPGARISGEILFEGKNLLELTPRQMQKLRGDRIAMISQDPLSSLHPFYSVGRQITEA
IRAHRRISERAALEEAIDILGRVGIHSPEKRVFDFPHQFSGGMRQRVMIAMAIVLRPALL
IADEPTTALDVTVQAQILALLNQMRRELGTAIIMVTHDLELLSSIADHAMVMYAGNRMEL
GPGEAVLKAPAHPYTLGLLRSSPTQETRGPLPSIPGQPPSLLAEQVGCAFAARCRSAMEV
CGQQRPPLREFDDETRSLCWLETKAASVAPSVRAEPIQDLQPPPDAPPIVSVRDVHLTYG
GRNLFGTTPGVEVLKGISFDLARGTTLGIVGESGCGKSTLARIIAGLLPPTSGDVVIEGE
SITGLDRRQWVEMRKRVQMVFQDPFGSLNPRRRVGSIIGDPFRIQNIASGADRKRRVREL
MEIVGLNPEHYNRFPSEFSGGQRQRIGIARALALNPSLIIFDEPVSALDVSIQAQILNLI
ARLQSELGLSYLFISHDLAVVRHVSSQIVVMKSGQIVEHADTQTLYNMPQHPYTRELLAA
ADPDFRSARPAALEIGV
NT seq 1854 nt   +upstreamnt  +downstreamnt
atgtccattagcgttccggccatgcccctcctcaccgtccgcaacctgcacatcgatatt
ccgacgggtgacggcgacgtgcatgcggtgcgggacgtctcgttcagcgtcgagccggaa
gagttgttcggcatcgcgggcgaatccggctcgggcaagagcgttctgtcccaggccata
ctcgggctcatgccgggggcccgcatcagcggggaaatcctcttcgaaggcaagaacctg
ctcgagctgacgccccgccagatgcagaagctacgcggggaccggatcgcgatgatctcc
caggatccgctttcgagcctccatcccttctacagcgtcggtcgccagatcaccgaagct
atccgcgcccatcgcaggatcagcgaacgcgccgcgctcgaggaggcgatcgacatcctg
ggccgggtgggcatccactcccccgagaagcgcgttttcgactttccccaccagttctcc
ggcggcatgcgccagcgcgtcatgatcgccatggccatcgtgctgcgccccgcgctgctg
atagcggacgagccgaccacggcactcgacgttaccgtgcaggcgcagatccttgcgctc
ctcaaccagatgcggcgcgaactgggtacggcgatcatcatggtgacgcacgatctcgag
ctgctgtcctccatcgccgatcacgccatggtcatgtatgcgggcaaccgcatggagcta
gggccgggcgaggctgtgctcaaggcgccggctcatccctacacgctggggctcctgcgg
tcatccccgacccaggagacccgcggcccgctcccctcgatccccggccagccgccgagc
ctgcttgccgaacaggtcggctgcgcgttcgccgcccgctgccggagcgcgatggaagtc
tgcggacagcagcgcccgcccctgcgcgaattcgacgatgaaacgcgttcgctctgctgg
ctggagacaaaggcggccagcgttgcgccctcggttcgggcagagccgatccaagacttg
cagccacctccggacgcgccgcccatcgtcagcgtcagggatgtgcatctcacctatggc
gggcgcaatcttttcgggacgacgcccggcgtggaagtcctcaagggcatcagcttcgac
cttgctcggggcacgaccctgggcatcgtgggcgagagcggttgtggcaagtccaccctg
gcgcgcatcatcgccggtctcttgccgccgacatcgggcgatgtcgtcatcgagggcgag
agcataaccgggctcgaccgccggcagtgggtcgagatgcgcaagcgcgtgcagatggtg
ttccaggaccccttcggttcgctcaatccgcgccgcagggtgggatccatcatcggcgat
ccgttccgcatccagaacatcgccagtggcgccgaccgcaagcgacgcgtgcgcgagctc
atggaaatcgtcggcctcaacccagagcattataaccggtttccctccgagttctcgggc
ggccagcggcagcgtatcggcattgcccgcgccctggcgctcaatccctcgctcatcatc
ttcgatgagccggtttcggcgctcgacgtttccatccaggcgcagatcctcaacctgatt
gcgcgcctgcaaagcgagttggggctctcctatctcttcatctcccatgacctggcggtc
gtgcgccacgtcagctcgcagatcgtggtcatgaagtccggacagatcgtcgagcatgcc
gacacccagaccctctataacatgccccagcacccctatacgcgcgagctgctcgccgcc
gccgacccggactttcggagcgcccggccggcagccctggagatcggcgtatga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (2)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (23)   
   Pfam (23)   
All databases (41)   

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