KEGG   Deinococcus gobiensis: DGo_CA0847
Entry
DGo_CA0847        CDS       T01827                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
dgo  Deinococcus gobiensis
Pathway
dgo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dgo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DGo_CA0847 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dgo03400]
    DGo_CA0847 (uvrB)
DNA repair and recombination proteins [BR:dgo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DGo_CA0847 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DGo_CA0847 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C UVR ResIII DEAD AAA_30 AAA_22 AAA
Other DBs
NCBI-ProteinID: AFD24774
UniProt: H8GYC1
Position
complement(943805..945820)
AA seq 671 aa
MLSVKSEFTPSGDQPTAIRSLVDGLDSGLRFQTLLGATGTGKTYSVAKVIEETGRPALIM
APNKILTAQLASEFREFFPDAAVEFFISYYDYYQPEAYVPGKDLFIEKDASVNQEIERLR
HSTTRSLLTRRDTIVVASVSCIYGLGDPKEYTALNAVLKKGGVMPRDELLGRLVNMQYER
NDIELMPGRFRAKGEMVEVWPAYDEQPLRIELWGDDVERISVVHPLTGDRLADLDATVVY
PAKHYVSSAGNIERAIVTIQEELDGRLEYFRSVGKLVEAQRLKERTLYDLEMLKVLGYCS
GIENYSRHIDGRVAGATPYTMLDYFPDDFVTFIDESHVTVPQIGGMANGDRARKQTLVDF
GFRLPSAMDNRPLNFQEFMDKTGQTVFVSATPGPFEREVSDSVADQIIRPTGLIDPPVTV
RPIQGQIEDLLGRVRVKAAAGERTLVTTLTKRMSEDLTEYLLEKGVKARYMHSDIDSVER
QVIIRDLRLGHYDVLVGINLLREGLDLPEVSLVAILDADKPGFLRSERALIQTIGRAARN
INGEVILYGDTVTPAMQYAMEETARRREKQQSYNEEHGITPQSVRKGVRDVIRGEEVAAE
ISSENVGDDRDALTRQLTDLELDMWQASEDLDFEKAASLRDQIRAIEAKLQGKEFKQATV
PGQKARKRGRR
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgttaagcgtcaagtccgaattcacgccgtcgggagaccagccgaccgccatccgatcg
ctcgtggacggcctggactcgggcctgcgcttccagacgctgctgggcgcgaccggcacc
ggcaagacctactcggtggcgaaggtcatcgaggagaccggccgcccggcgctgatcatg
gccccgaacaagatcctcacggcgcagctcgcctccgagttccgcgagttcttccccgac
gcggccgtcgagttcttcatcagctactacgactactaccagcccgaggcctacgtgccg
ggcaaggacctgttcatcgagaaggacgcctcggtgaaccaggagatcgagcggctgcgg
cactcgacgacccgcagcctgctcacgcgccgcgacaccatcgtggtggcgtcggtgagc
tgcatctatggcctgggcgaccccaaggaatacaccgccctgaacgccgtgctgaaaaag
ggcggcgtgatgccccgcgacgaactgctgggccggctggtgaacatgcagtacgagcgc
aacgatatcgagctgatgccggggcgcttccgggccaagggcgagatggtggaagtctgg
cccgcgtacgacgaacaacccctgcgtatcgagttgtggggcgacgacgtcgagcgcatc
agcgtggtacacccgctgacgggcgaccgcctggccgacctcgacgcgacggtggtctac
cccgccaagcactacgtgagcagcgcgggcaacatcgagcgggccatcgtgaccatccag
gaggaactcgacgggcggctcgaatacttccggtcggtgggcaagctcgtcgaggcgcag
cgcctcaaggaacgcacgctgtacgacctggagatgctcaaggtgctgggctactgctcg
ggcatcgagaactactcgcgccacatcgacggccgcgtggccggggccaccccgtacacc
atgctcgactactttcccgacgacttcgtgaccttcatcgacgagtcgcacgtgacggtg
ccgcagatcggcgggatggcgaacggcgaccgcgcccgcaagcagacgctcgtggacttc
gggttccggctgccgagcgcgatggacaaccgccccctgaacttccaggagttcatggac
aagacgggtcagaccgtgttcgtctcggccacgcccggacccttcgagcgcgaggtgagc
gactcggtggccgaccagatcatccgcccgaccggcctcatcgacccgcccgtgacggtg
cggcccatccagggccagatcgaggacctgctggggcgcgtccgcgtgaaggcggcggcg
ggcgagcgcaccctggtcacgacgctcaccaaacggatgtcggaagacctcaccgaatac
ctgctcgaaaagggcgtcaaggcgcgttacatgcactccgacatcgacagtgtggagcgg
caggtcatcatccgcgacctgcggctggggcactacgacgtgctcgtgggcatcaacctg
ctgcgcgaggggctcgacctgcccgaggtgtcgctcgtcgccatcctggacgccgacaag
ccgggcttcctgcgttccgagcgggccctcatccagaccatcgggcgcgcggcgcgcaac
atcaacggcgaggtcatcctgtacggcgacacggtgactccggccatgcagtacgcgatg
gaggaaaccgcccgccgccgcgaaaaacagcagagctacaacgaggaacacggcatcacg
ccccagagcgtgcgcaagggcgtgcgcgacgtgatccggggcgaggaggtggccgccgag
atcagcagcgagaacgtgggcgacgaccgagacgccctgacgcgccagctcacggacctc
gaactcgacatgtggcaggcctccgaggacctcgacttcgagaaggccgcctcgctgcgc
gaccagatccgcgccatcgaggccaagcttcagggcaaggagttcaagcaggccaccgtg
ccgggccagaaggccaggaagcgcggccggcgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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