KEGG   Desulfurispirillum indicum: Selin_2159
Entry
Selin_2159        CDS       T01383                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
din  Desulfurispirillum indicum
Pathway
din03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:din00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Selin_2159
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:din03019]
    Selin_2159
Enzymes [BR:din01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Selin_2159
Messenger RNA biogenesis [BR:din03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Selin_2159
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UTP25 P-loop_SecA UvrD-helicase AAA_22 Flavi_DEAD
Other DBs
NCBI-ProteinID: ADU66879
UniProt: E6W3C5
Position
complement(2384872..2386245)
AA seq 457 aa
MLFSDLGLSAPILRAVAAEGYTQPTPVQQQAIPAILQGRDIQAGAQTGTGKTAGFTLPML
EILERQAIRGRRHVRALILTPTRELAAQVEESVRTYGKHLSLKSAVIFGGVAMGPQLANL
RRGVDIVVATPGRLLDHVQQKSIDLSKVEFLVLDEADRMLDMGFIHDIRKVLALLPKERQ
NLLFSATFSREITELASSFMKDPVQVEVARRNTAAETVDQVVHLVDRERKRELLSKLISE
GKWQQVLVFTRTKHGANRLAQQLEKDGIHSAAIHGNKSQSARTKALADFKKGQVRVLVAT
DIAARGLDIDELPHVVNFELPNVPEDYVHRIGRTGRAGNCGKACSLVCVDEKQLLKGIEG
LLKRDIPQEHIKGFEPDPSIPAEPIQNGRNNRQGQGRARSGAQPAKSARAFPSTSTGARP
KSAGSRPARQGASAGKQVKFQGASRDGKPRVFDFRSQ
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgttattttccgatcttggcctttcggccccgattctgcgtgccgttgccgctgaaggc
tacacgcagccaactcctgtccaacaacaggctattcccgccattctgcaaggcagagac
attcaggcgggtgcccagaccggcactggcaaaactgccggcttcaccctgcccatgctg
gaaattctggagcgccaggccattcgtggccgtcgccatgtgcgcgccctcatcctgacg
cccacccgcgaactggcagcccaggtagaggaaagtgtgcgcacctatggcaagcacctc
tccctgaaatccgccgtgatcttcggtggggttgccatgggtccccagctcgccaatctg
cgccgtggcgtggacattgtggttgccactcccggacgcttgctggaccacgttcagcaa
aagagtattgacctgtccaaagtggaattcctcgtactcgatgaggccgaccgcatgctg
gacatgggctttatccacgacatccgcaaggttttggccctgctgcccaaagagcgccag
aacctgctcttctctgccaccttctcccgcgaaatcaccgagctggccagcagcttcatg
aaggatccggtgcaggtggaagtggcccgtcgcaacacggctgctgaaaccgttgaccag
gtggttcacctggtcgaccgcgagcgcaagcgcgagctgctttccaagcttatcagcgag
ggaaaatggcagcaggtgctggtcttcacccgcaccaagcatggcgccaaccgcctggcc
cagcagctggaaaaagacggcattcactccgctgccatccacggcaacaagagccagagt
gctcgcaccaaggcgctggccgacttcaaaaaaggtcaggtcagggtactggtggccacc
gatattgccgcccgtggactggatattgacgagttgccccacgtggtcaactttgaactg
ccaaatgtgcccgaagactacgtgcaccgcatcggccgcaccggccgcgctggcaactgc
ggcaaggcctgctccctggtgtgcgttgatgaaaaacagctgctgaaaggaattgaaggc
ctgctgaagcgtgacattccccaggagcatatcaagggttttgaacccgacccctctatc
ccggctgagcccatccagaatggtcgcaataaccgtcaggggcagggacgggcacgcagt
ggagcgcagcccgcgaaaagcgcccgcgcgttcccctcaacctccacaggcgctcgtccg
aaaagcgcgggcagccgacccgcccgtcagggagcctctgccggcaagcaggtcaaattc
cagggtgcttcccgtgatggcaagcccagggtatttgattttcgttcccagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (30)   

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