KEGG   Dehalococcoides mccartyi BTF08: btf_919
Entry
btf_919           CDS       T02475                                 
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
dmc  Dehalococcoides mccartyi BTF08
Pathway
dmc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dmc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    btf_919 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dmc03019]
    btf_919 (pnp)
   03016 Transfer RNA biogenesis [BR:dmc03016]
    btf_919 (pnp)
Enzymes [BR:dmc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     btf_919 (pnp)
Messenger RNA biogenesis [BR:dmc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     btf_919 (pnp)
Transfer RNA biogenesis [BR:dmc03016]
 Prokaryotic type
  tRNA degradation factors
   btf_919 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 KH_1 PNPase KhpA-B_KH KH_2 Alg14 CsrA
Other DBs
NCBI-ProteinID: AGG08004
Position
852184..854346
AA seq 720 aa
MITANSFERTIGGRKLVIESGKLARLADAAITIRYADTELLVTLCSAKKPREGVDFLPLT
IDYEERMYAAGKIPGGFIRREGRPSEQAILAGRLTDRPLRPLLPKEWRNDLQIIITVIAS
DKENDADIWGVVGASTVLAMSEIPYEGPVGASRIGYINGEFVLNPTFAQLESSQLDLVVV
STRKAVVMIEAGSKEIPEDIMINAIEFAHKANQELIDLQDEIRAKLGKEKLPVPVLEIPE
EVKTAVAAFVKGRVNEALSHQDKTARENAVEGLQAELVAALSETFAEGDILAAYDKEIKK
AIRSTILEKDIRVNGRGIKQLRQLDAETGLLPRVHGSALFTRGDTQVMAITTLGSLQESQ
QLDGLSAEDTKRFMLHYNFAPFSTGEVKRSGSPGRREIGHGALAERALVPVLPTPEEFPY
TIRLVADVVGSSGSTSMGSVCSSSLSLMDAGVPVKKAVAGISIGLITGENDTYCTITDIE
GIEDNYGDMDFKVAGTRDGITAIQVDMKVKGISFDIIRDAIYQAKEARYNILDVMDKALA
QPKTELSPYAPRMYKINIDPSKIGSVIGSGGKTIRSIIEQTNTTVDIENDGTVVIGATDE
ASAKKAIKIIEDLTKDIEAGSIYTGKVTRIMTFGAFVEILPGKEGMVHISELADHRVEKV
EDIVKVGDDITVKVIEIDNQGRVNLSHRVILNPNAVPISRNRDSQPRRPGPFRPSDRSNS
NT seq 2163 nt   +upstreamnt  +downstreamnt
ttgataactgccaactcatttgaacgaactatcggcggcaggaaacttgttattgagagc
gggaaacttgcccgtcttgcagatgccgcgattactatccgctatgcggatactgaatta
ctggtaacactttgttctgccaagaaacctcgcgaaggggtagattttctccccctgact
atagattacgaagagcggatgtatgccgccggcaaaatccccggcgggtttatccgccgt
gaaggccgccccagtgaacaggctattttggctgggcgactgactgacagacctcttcgc
cctcttctccccaaagagtggcgcaatgatcttcagattattattaccgtaattgcttca
gacaaggaaaacgacgctgatatctggggcgtagtgggtgcttccacagttctggccatg
tctgaaataccatatgaaggtccggtcggagccagccgtattggatatataaacggtgaa
tttgtgcttaatcccacttttgcccagttggaatcaagccagctggatctggtggtagtc
agcacccgcaaagcggtggtgatgattgaagccggttccaaagaaattcctgaagacatt
atgattaacgctattgagtttgcccataaggcaaatcaagagcttattgacctccaggat
gaaatccgtgccaagctcggcaaagaaaagctacccgtgccggtgcttgaaatacccgaa
gaagtcaaaacggctgttgccgcttttgtaaaaggacgggtaaatgaagcccttagccac
caagataaaaccgcccgtgaaaatgcggttgaaggccttcaggctgaactggttgcggct
ttatcagaaacattcgccgaaggtgatatcctggccgcttatgacaaagaaatcaagaaa
gctatccgctctactatacttgagaaggatatccgggtaaacggacggggtatcaaacag
cttcgccagctggatgctgaaacagggcttttgccccgcgtccatggctctgctttattc
acccgcggtgatacccaggtcatggctataaccacccttggttctttacaggaatcccaa
cagctggatggcttaagtgccgaagataccaagcgttttatgcttcactacaactttgcc
cccttctctaccggtgaagtaaaacgttccggttctcccggacggcgtgaaatcggtcat
ggcgctttggccgaacgtgccttagtgcctgtcctgcccactccggaagaattcccctat
accattcgtctggtagctgacgtggttggctcatcaggctctacctctatgggcagtgtc
tgttcgtccagcctgtcacttatggatgcaggcgtaccggtcaaaaaagctgttgcagga
atctccatcggccttattaccggtgaaaatgatacctactgcaccattactgatattgaa
ggcatcgaagataactacggcgatatggactttaaagttgccggtacccgtgacggcata
accgccatacaagtggatatgaaggtcaagggtatcagttttgatattatccgtgatgcc
atataccaggcaaaagaagcccgctataacatactggacgtaatggacaaagctcttgcc
cagcctaaaacagagcttagcccttatgcccccagaatgtacaagataaatattgacccc
tccaagattggcagtgttatcggcagcggcggcaaaactatccgctctattattgagcaa
accaatactaccgttgacattgaaaatgacggcacagtggttattggtgctactgacgag
gcttcggctaaaaaggccatcaagataattgaagacctgactaaagacatcgaagccggc
agtatttataccggtaaggtcacccgtataatgaccttcggtgcttttgttgaaatcctg
cccggaaaagaaggcatggtacacataagcgaactggccgaccacagagttgaaaaagta
gaagatatagtcaaggtgggtgatgatataacggttaaggttatagagattgataaccag
ggcagggtaaacctgtcacacagggttattctcaatccgaacgctgtacccatttcacgc
aaccgtgattctcagccgcgtcgtcccggtcctttccgcccttctgaccggtctaactca
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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