KEGG   Dehalococcoides mccartyi DCMB5: dcmb_555
Entry
dcmb_555          CDS       T02476                                 
Symbol
uvrA
Name
(GenBank) UvrABC system, subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
dmd  Dehalococcoides mccartyi DCMB5
Pathway
dmd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dmd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    dcmb_555 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dmd03400]
    dcmb_555 (uvrA)
DNA repair and recombination proteins [BR:dmd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     dcmb_555 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      dcmb_555 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 AAA_25 RsgA_GTPase AAA_33 AAA_23 NACHT AAA_21 DnaJ_CXXCXGXG DUF5351 Viral_helicase1 DUF4350 YhfH
Other DBs
NCBI-ProteinID: AGG06183
UniProt: A0AA86DKZ1
Position
540593..543427
AA seq 944 aa
MAQEYIKIKGAREHNLKNIDVQIPRDKLVVVTGLSGSGKSSLAFDTVYAEGQRRYMESLS
SYARQFLGRMEKPDVDHIEGLSPAIAIDQKGVSHNPRSTVGTVTEIYDYLRLLFARTGHP
HCPECGKEISAQSVEQITDAVQLLPEGAKILILGPLVRGRKGEYTQMFKDLRKSGYARVR
VDGQIKDLSEDIELDKNKKHDIEAVVDRLVVGQAGSQGRVADSVETALKLGGGLVVISVV
DGQDMLFSEKFSCADCGVSLGEIEPRTFSFNTPHGACQTCMGLGAKMELDPELIIPDKNL
SLADGAISPYQNQNWYFGQVEDLARRAGFSLNKPVSTFTPEQMQLLLYGEGGDIHKYRNR
YGRVREYTSGFEGVIPRLDRLYRDSESQGVRESIEKYMLASPCQACGGKRLRKEALSVKI
GERNIADVAGMSVDEQFKWANELAGKNTLFSKREQLIAAQILKEIRSRLGFLNNVGLEYL
TIDRIAGTLSGGEAQRIRLASQIGSGLMGVLYVCDEPTIGLHPADDTRLVETLQKLRDLG
NTILVVEHDESVMRAADYIIDMGPGAGEHGGRVVATGNISEIMQNPASLTGQYLSGAKVI
PVPEKRRDGNGQELLIQGARQNNLKNIDVHIPLGKLVCVSGVSGSGKSTLVTDILFKHLA
QVFYGAKDRAGGSDSITGTEHIDKIIEINQSPIGRTPRSNPATYTGAFTNIRELFASVPE
SKVKGYGPGRFSFNIKGGRCETCGGEGYIQIEMQFLPDVTVPCEVCHGARYNREVLEIKF
KDKNIADVLDMTVDRALEFFENFPKISSKLQTMQDVGLGYIRIGQPAPTLSGGEAQRIKL
ATELSKRATGRTLYILDEPTTGLSFEDVAALLRVLQRLVDSGNTVVVIEHQLDVIKNADW
IIDLGPGAGIKGGQIVAEGIPEDVALNKASVTGKYLRRVLPKLK
NT seq 2835 nt   +upstreamnt  +downstreamnt
gtggctcaggaatatataaaaattaaaggtgcccgcgaacacaacctcaaaaacatagat
gtccaaattccccgtgacaaactggtggttgtgaccgggctttcagggtcaggtaagagc
tctttggcttttgataccgtttatgccgaagggcagcgccgctatatggagtctctttcc
tcttatgcccgccagtttctgggcagaatggaaaaaccggacgtagaccatatagagggg
ctttcaccggctatcgccattgaccagaaaggggtcagccacaacccccgttccacagta
ggcacagtgactgaaatatatgattacctgcgtttgctgtttgcccgtaccggccaccct
cattgcccggagtgcggcaaggagatttctgcccagagtgtggaacagataaccgatgca
gtccagctgttacctgagggtgccaagatactcattctgggaccgctggtaaggggacgc
aagggtgagtatacccagatgtttaaagacctccgcaaatcaggctacgccagagttagg
gtggacgggcagattaaagatttgtccgaagatatagaactggataaaaacaaaaaacat
gatatagaagcggtggtagaccgtctggtggttggtcaggcaggctcacagggacgtgtt
gcggattcggttgaaactgccctgaagctgggcggcgggctggtggtaatatcagtggtg
gacgggcaggatatgcttttttccgaaaaattttcctgtgcggattgcggtgtaagcctg
ggtgaaatagaaccccgaacttttagtttcaatactccccatggcgcctgccagacgtgt
atggggctgggtgccaagatggagcttgaccctgagctgattataccggacaaaaatctg
tctctggcggacggggctatcagtccttatcagaaccagaactggtacttcggacaggtg
gaagatttggcccgcagggcgggtttttcgctcaacaagcctgtttccacttttactcct
gaacaaatgcagttattgctctacggtgagggtggtgatattcataaataccgcaaccgc
tacgggcgtgtaagggaatacaccagtggttttgaaggggttataccccgtctggacaga
ctttaccgtgatagtgagtctcagggagtacgggagagtattgaaaaatatatgctggct
agcccctgtcaggcttgcggcggcaaaaggcttcgcaaggaagccctgtcagtaaagata
ggcgaacgcaacattgccgatgtggcgggtatgtccgtagatgaacagtttaaatgggca
aatgaactggctggcaaaaataccctgtttagcaaacgggaacagcttatagccgcccag
atactcaaagagatacgttcacgtttggggttcttaaataatgtgggtctggagtattta
actatagaccgtattgccggaaccttatccggcggtgaggcccagcggatacgtttggcc
tcacagattggctccggcctgatgggggtgctatacgtttgtgacgaacctaccataggc
ttgcacccggcagatgatacccgtctggtggaaaccctgcagaaactgcgtgatttgggc
aataccatactggtagtggagcacgatgaatctgtgatgagggcggcggactatattata
gatatggggccgggggcgggtgaacacggcgggcgggtagtggctaccggcaatatcagc
gaaataatgcaaaacccggcttcacttaccggccagtatctatccggcgccaaggtaata
cctgtgcccgaaaaacggcgggatggtaacgggcaggaactgctcatacagggtgcccgc
cagaataatcttaaaaatatagacgtacatatccctctgggcaagctggtttgcgtcagc
ggcgtttccggcagtggcaagtccactctggttaccgatattcttttcaaacatctggct
caggtattttacggggctaaagacagggccggcgggtcagattctataaccggcacggag
cacattgacaagataatagaaataaatcagtcgcccatcgggcggacaccccgttcaaat
ccggctacctatacaggggcatttaccaatatacgggaattgtttgcgtcagtgcccgaa
tccaaggtaaagggttacgggccggggcggttttcatttaacataaaaggtggacgctgc
gaaacctgtggcggagagggttatatccagatagaaatgcaatttctgccggatgtgact
gttccctgtgaagtttgccacggggcacgttataaccgcgaagtgctggagataaaattt
aaagataaaaacattgcagacgtactggatatgacagtggacagggcgctggagtttttt
gaaaatttccccaaaatcagctccaaactgcaaaccatgcaggatgtgggtttggggtat
atccgcataggtcagccggcacctacattgtcggggggtgaggcccagcgtatcaaactg
gcaaccgaactttccaaacgggctaccgggcggactttatacatactggacgaacctact
accgggctttcttttgaagatgtggcggcacttctgcgggtgcttcagcggctggtagac
agcggcaatactgtggtagttattgagcaccagctggatgtcatcaagaatgcagactgg
ataatagacctagggccgggtgcaggcataaaaggcgggcagattgtagctgagggtata
cctgaagatgttgccttgaataaagcctccgtgaccggcaaatacctgcggcgggtttta
ccgaaactgaaatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (26)   

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