KEGG   Desulfosudis oleivorans: Dole_0245
Entry
Dole_0245         CDS       T00610                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
dol  Desulfosudis oleivorans
Brite
KEGG Orthology (KO) [BR:dol00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dol02048]
    Dole_0245
Enzymes [BR:dol01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Dole_0245
Prokaryotic defense system [BR:dol02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Dole_0245
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII DEAD T1RH-like_C
Other DBs
NCBI-ProteinID: ABW66055
UniProt: A8ZS37
Position
complement(274010..277126)
AA seq 1038 aa
MPEKPRPERITQNRVIALFTDKSRPDCLGYQYLGDWSKRDNNRPVEAEYLRANLKKRGYS
DAHISAALLQLEIAAGTTGVTLYQANLRTYNLLRYPVKVLLAPGQPHEDVHLIDWEHPEN
NDFALAEEVTLKGGYERRPDLVLYINGMAIGVIELKRSSVEVADGVRQLITNQEKIFNEG
FFSTVQLVFAGSDSQGLRYGTTGTPEQFFVQWKDEEGDSALAPGTLLDKPLAQMCNKKRL
LDLIRNCIIFDAGQKKVPRPHQYFGFKAAQERIRRREGGVIWHTQGSGKSILMVLIAKWL
MEHDPDARILVITDRDELDKQIVDVMRNAGVVGEDAPSPRITSRAQFVEKIGATTPRLLC
ALIHKFETTDLKGNPPPIHGRFYIFVDECHRTQGGDMNRQMKRWMQDAIFIGFTGTPLLR
RDKLMTRDVFGTYIHTYKFHQGVADKVILDLKYEARNVPQRLTSQKAIDAWFEQKTKNLN
NFQKAIVRKTWATMEKLMSAGERKQRIIADIIQDFSLKPRLNNDRGTAILVTASIYDACH
YFRLFQNTGFGAYCGIITSYEPNANAISKEPANSNERYKFDTYKQCVLDAFTTTEKYEAE
TRRRFIEEPANCKLLIVVSKLLTGFDAPSCTYIYLDNEMHDHTLFQAICRTNRLDGDDKE
YGHIVDFKELFGDVQQAIAVYNSDELDIDEGGGGENNIHLKDWLKEGKKKLDDTREALKY
LCAPVPEPREMEQYLFYFCGNADNPNALTDTEALRVSFYKSVATFVRAFAAVSQYLAEAG
YSAAEIATLNNEVKFFSDTRAAIKKHSGEELDIKPYEADMRHLLNTYIQADPADPLGEMD
RYSLVELIIKTGIHDAIAKKLNEKGKLSKTAVAEGIIHNIRKTIIREQLADPRFYEEMSK
LLDDLIKQRQDDTKSYEEFLKQAEALVKKMSKGQPGKNIPQELHGRPEATVIYNNLPDIL
MHLASEDMVQDPVTGFGATRLGLALEIDRAMREHAPAGWKGDDTREKQVLNALFPLLKRN
RKATMAAFELIKNMSGYA
NT seq 3117 nt   +upstreamnt  +downstreamnt
atgcctgaaaaaccccgccctgagcggattacccagaatcgcgtgattgccctgtttacc
gacaaatcccggccggattgtcttgggtatcaatacctgggtgactggagcaagcgcgac
aacaaccggcccgttgaggcggagtatctccgggcgaacctgaaaaagcgcggctattcg
gacgcccatatttcagccgctctgctgcaactggaaatcgccgccggcaccaccggggtg
acgctttaccaggccaatctgcgcacctacaatctgctgcgctacccggtgaaggtgctg
ctggcgccgggccagccgcacgaggatgtgcatttgatcgactgggaacatcctgaaaac
aatgattttgccctggccgaggaagtgacccttaaaggtggctacgagcggcggcccgac
ctggtattgtacatcaacggcatggccattggcgtgattgaactcaagcgcagctcggtg
gaggtggccgacggggttcgccagctcatcaccaaccaggaaaagatattcaacgagggt
ttcttttccacggtgcagcttgtgtttgcgggcagcgattctcaaggcttgcgttacggc
accaccggcacgccggagcagttctttgttcaatggaaagacgaggaaggcgacagtgcg
cttgcgcccggcaccctgcttgacaagcccctggcccagatgtgcaacaaaaagcggttg
ctggacctgattcgcaactgcattattttcgatgccgggcagaaaaaggtgccccggccc
catcagtatttcggttttaaggctgcccaggagagaatccgccggcgcgagggcggcgtt
atctggcacacccagggcagcggcaaaagcatcctcatggtgttgatcgccaaatggctg
atggaacacgaccctgacgcgcgtattctggtcatcacggaccgggacgaactggacaaa
cagattgtggatgtaatgcgaaacgccggggtggtcggcgaggacgcaccttcgccgcgc
attacctcgcgggcgcagtttgtcgaaaagatcggtgcgacaacgccgcgcctgctctgc
gctctgattcacaagttcgagacgaccgacctgaaaggcaacccgccgccgattcacggg
cgcttctacatttttgtggatgaatgtcaccgcacccagggcggggacatgaaccggcag
atgaaacggtggatgcaggacgcgatttttatcggctttaccggcaccccgcttttgcgc
cgggacaaattgatgacccgggatgtttttggaacctacattcacacctataaattccac
cagggcgtggccgacaaggtcattctggacctcaagtatgaggcccgcaatgtgccgcag
cgcctcacttcccaaaaagccattgacgcctggtttgagcagaagacaaaaaacctgaac
aattttcagaaggccattgtaagaaaaacctgggccaccatggaaaagctgatgagcgcg
ggcgagcgcaagcaacgcattattgccgatatcatccaggatttcagccttaaaccgcgc
ctgaacaatgatcgcggcaccgccattctggtgacggcctcgatttacgacgcctgtcac
tatttccggctgtttcaaaacaccggctttggcgcgtactgcggcatcatcacctcttac
gagccgaacgccaacgccatttccaaagaaccggccaacagcaatgagcgctacaagttt
gacacctataagcagtgtgttttggatgcgtttaccacaacggaaaaatacgaggcggaa
accaggcggcgctttattgaagagccggccaactgcaagctgctgatcgtggtcagcaaa
ctgctgaccgggtttgacgccccctcctgcacctatatctatcttgataatgagatgcat
gaccacaccctgtttcaggctatctgccgcaccaaccgcctggatggtgacgacaaggag
tatggccacattgtcgacttcaaggagctgttcggcgatgtgcagcaggccattgccgtt
tacaattccgatgagctggatatagacgagggcggcgggggggagaacaacatccacctg
aaggactggctgaaagagggcaaaaagaaacttgatgacacccgcgaggccctgaagtat
ctctgcgcgccggttcccgagccgcgtgaaatggagcagtatcttttctatttctgcggc
aacgccgataatccgaacgcgcttaccgacacagaggccctgcgcgtatcgttctacaag
tcagtggccacgtttgtgcgggcgtttgccgctgtttcccaatacctggccgaggcgggg
tattcggccgctgaaattgccacgctgaacaacgaggtcaaattcttcagtgatacgcgg
gcggccattaaaaaacattccggcgaagagttggacatcaagccctatgaagcggacatg
cgtcatctgctcaacacctatattcaggctgatccggccgatccactgggcgaaatggac
cggtactcgctggtggaacttatcatcaaaaccggcattcatgacgccattgcaaaaaaa
ctcaacgaaaagggaaagctgtcaaagaccgcggttgccgagggcattatccacaacatc
cgcaagaccatcattcgggagcagttggccgatccccgattctacgaagagatgtccaag
ctgttggatgatctgatcaaacagcggcaggatgatacaaagtcctatgaagaatttctc
aaacaggccgaggccctggttaaaaaaatgtccaaggggcagcctgggaaaaatattccc
caggaacttcacggaaggcccgaagcaaccgtgatttacaataacctgccggatattctg
atgcaccttgcgtccgaagacatggttcaggatccggtaaccggcttcggcgctacccgg
ctcgggcttgccctggaaatcgaccgcgccatgcgggaacacgcaccggccggatggaag
ggggatgacacccgggaaaaacaggttttaaatgcgttgtttccccttttaaaacggaat
cgcaaggcaacgatggcggcgtttgaactcataaaaaacatgtcgggttacgcatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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